Job Description P07862 Confidence 99.04% Date Thu Jan 5 11:00:37 GMT 2012 Rank 80 Aligned Residues 247 % Identity 18% Template c2pbzC_ PDB info PDB header:ligase Chain: C: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of an imp biosynthesis protein purp from2 thermococcus kodakaraensis Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.			.	.	.	.	.	.	.	.	70	.	.												.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.												.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.												.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	S	G	A	A	V	L	A	G	L	R	E	G	G	I	D	A	Y	P	V	D	P	K	E	V	D	V	T	Q	L	K	S	M	G	F	Q	K	V	F	I	A	.	.	L	H	G	R	G	G	E	D	G	T	L	.	.	.	.	.	.	.	.	.	.	.	Q	G	M	L	E	L	M	G	L	P	Y	T	G	S	G
Query Conservation																																											.	.												.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																											.	.												.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	S	S	L	Q	I	L	L	G	A	K	K	E	G	F	K	T	R	L	Y	V	S	P	K	R	R	P	F	Y	S	S	L	P	I	V	D	D	L	V	V	A	E	E	X	T	S	I	L	N	D	D	G	I	V	V	P	H	G	S	F	V	A	Y	L	G	I	E	A	I	E	K	A	K	A	R	F	F	G	N	R
Template Known Secondary structure		T	T											T	T									T	T	T						T		T	T		S						S		S			T	T			S	S	B				B	T	T					S							T			S			B	S		S
Template Predicted Secondary structure
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	M	A	S	A	L	S	M	D	K	L	R	S	K	L	L	W	Q	G	A	G	L	P	V	A	P	W	V	A	L	T	R	A	E	F	E	K	G	L	S	D	K	Q	L	A	E	I	S	A	L	G	L	P	V	I	V	K	P	S	R	E	G	S	S	V	G	M	S	K	V	V	A	E	N	A	L	Q	D	A	L
Query Conservation
Alig confidence			.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.
Template Conservation			.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.
Template Sequence		R	.	F	L	K	W	E	T	T	F	E	L	Q	D	K	A	L	E	G	A	G	I	P	R	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	V	V	E	P	E	D	A	K	P	D	E	L	Y	F	V	R	I	E	G	S	E	L	.	.	.	.
Template Known Secondary structure		S	.	G	G	G	G	G	S												T	T			B		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		B			S					S	S													.	.	.	.
Template Predicted Secondary structure			.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.
Template SS confidence
		91		.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.																													.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.								.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																																								.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.
Query Sequence		R	L	A	F	Q	H	D	E	E	V	L	I	E	K	W	L	S	G	P	E	F	T	V	A	I	L	G	E	E	I	L	P	S	I	R	I	Q	P	.	.	.	.	.	.	.	S	G	T	F	Y	D	Y	E	A	K	Y	L	S	D	E	T	Q	Y	F	C	P	A	G	L	E	A	S	Q	E	A	N	L	Q	A	L
Query Conservation																																								.	.	.	.	.	.	.
Alig confidence		.	.	.																																				.	.	.	.	.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	E	E	R	L	S	P	Y	R	V	E	R	F	I	P	G	V	Y	L	Y	V	H	F	F	Y	S	P	I	L	E	R	L	E	L	L	G	V	D	E	R	V	L	I	A	D	G	N	A	R	W	P	V	K	P	L	P	Y	T	I	V	G	N	R	A	I	A	L	R	E	S	L	L	P	Q	L	Y	D	Y
Template Known Secondary structure		.	.	.	S														S											T	T	T	T													T	T		S	S	S	S	S			S																G	G	G
Template Predicted Secondary structure		.	.	.
Template SS confidence
					150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		241	.	.	.	.	.	.	.							.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.		.	.	.	.	.	280		.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.																											.							.
Query SS confidence										.	.	.	.	.	.																											.							.
Query Sequence		V	L	K	A	W	T	T	L	.	.	.	.	.	.	G	C	K	G	W	G	R	I	D	V	M	L	D	S	D	G	Q	F	Y	L	L	E	A	N	T	S	.	P	G	M	T	S	H	.	S	L	V	P	M	A	A	R	Q	A	G	M	S	F	S	Q	L	V	V	R	I	L	E	L	A
Query Conservation										.	.	.	.	.	.																											.							.
Alig confidence										.	.	.	.	.	.													.	.													.							.
Template Conservation																												.	.
Template Sequence		G	L	A	F	V	R	T	X	R	E	L	E	P	P	G	V	I	G	P	F	A	L	H	F	A	Y	.	.	D	G	S	F	K	A	I	G	I	A	S	R	I	D	G	G	S	N	A	D	H	W	Y	S	E	L	Y	W	G	E	R	L	S	X	G	R	R	I	A	R	E	L	R	L	A
Template Known Secondary structure													S	T	T				S									.	.	S	S	S								S	S	B		S	G	G	G	S				S					S	S	S
Template Predicted Secondary structure																												.	.
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.			.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions