Job Description P07862 Confidence 98.83% Date Thu Jan 5 11:00:37 GMT 2012 Rank 84 Aligned Residues 156 % Identity 15% Template c1eucB_ PDB info PDB header:ligase Chain: B: PDB Molecule:succinyl-coa synthetase, beta chain; PDBTitle: crystal structure of dephosphorylated pig heart, gtp-2 specific succinyl-coa synthetase Resolution 2.10 Å

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		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.												.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																																												.																.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.																.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	R	S	K	L	L	W	Q	G	A	G	L	P	V	A	P	W	V	A	L	T	R	A	E	F	E	K	G	L	S	D	K	Q	L	A	E	I	S	A	L	G	L	.	P	V	I	V	K	P	S	R	E	G	S	S	V	G	M	.	.	.	.	.	.	.	.	.	.	.	S	K	V	V	A	E	N	A	L	Q	D
Query Conservation																																												.																.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.														.																.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.
Template Sequence		Y	Q	S	K	K	L	M	S	D	N	G	V	K	V	Q	R	F	F	V	A	D	T	.	.	.	.	.	.	.	A	N	E	A	L	E	A	A	K	R	L	N	A	K	E	I	V	L	K	A	Q	I	L	A	G	G	R	G	K	G	V	F	S	S	G	L	K	G	G	V	H	L	T	K	D	P	E	V	V	G	Q
Template Known Secondary structure										T	T	T										S	S	.	.	.	.	.	.	.												T		S	S								S	S	S			T	T				T	T	S		B		S					S
Template Predicted Secondary structure																								.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.								.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		166	.	.	.	170	.														.	.	.	.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.			.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.														.																					.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.														.																					.	.
Query Sequence		A	L	R	L	A	F	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	H	D	E	E	V	L	I	E	K	W	L	S	.	G	P	E	F	T	V	A	I	L	G	E	E	I	L	P	S	I	R	I	Q	.	.	P	S	G	T	F	Y	D	Y	E	A	K	Y	L	S	D	E	T	Q	Y	F	C	P	A	G	L
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.														.																					.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.														.																					.	.
Template Conservation
Template Sequence		L	A	K	Q	M	I	G	Y	N	L	A	T	K	Q	T	P	K	E	G	V	K	V	N	K	V	M	V	A	E	A	L	D	I	S	R	E	T	Y	L	A	I	L	M	D	R	S	C	N	G	P	V	L	V	G	S	P	Q	G	G	V	D	I	E	E	V	A	A	S	N	P	E	L	I	F	K	E	Q	I	D	I
Template Known Secondary structure					T	T	T	T	S					T	T	S		T	T																S											G	G	G	T								S	S		S	S										G	G	G							B	T
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
																				230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	S	Q	E	A	N	L	Q	A	L	V	L	K	A	W	T	T	L	G	C	K	G	W	G	R	I	D	V	M	L	D	S	D	G	Q	F	Y	L	L	E	A	N	T
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	E	G	I	K	D	S	Q	A	Q	R	M	A	E	N	L	G	F	L	G	P	L	Q	N	Q	A	A	D	Q	I	K	K	L	Y	N	L	F	.	.	.	.	.	.	.	.	.	.	.	.	.	L	K	I	D	A	T	Q	V	E	V	N	P
Template Known Secondary structure		T	T	B													T	T			T																		.	.	.	.	.	.	.	.	.	.	.	.	.			T	T
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.														.	.	.	.	200	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions