Job Description P00893 Confidence 92.99% Date Thu Jan 5 10:57:03 GMT 2012 Rank 130 Aligned Residues 166 % Identity 12% Template d2ieaa1 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) TK-like Pyr module Resolution 1.85

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		7	.	.	10	.	.	.	.	.	.	.	.	.			20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40										.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.						.	.	70
Predicted Secondary structure															.	.																						.	.	.	.	.	.	.	.	.																												.	.	.	.	.
Query SS confidence															.	.																						.	.	.	.	.	.	.	.	.																												.	.	.	.	.
Query Sequence		A	E	M	V	V	R	S	L	I	D	Q	G	V	.	.	K	Q	V	F	G	Y	P	G	G	A	V	L	D	I	Y	D	A	L	H	T	V	.	.	.	.	.	.	.	.	.	G	G	I	D	H	V	L	V	R	H	E	Q	A	A	V	H	M	A	D	G	L	A	R	A	T	G	E	.	.	.	.	.	V	G	V
Query Conservation															.	.																						.	.	.	.	.	.	.	.	.																												.	.	.	.	.
Alig confidence															.	.																						.	.	.	.	.	.	.	.	.																												.	.	.	.	.
Template Conservation
Template Sequence		V	R	A	L	N	V	M	L	K	N	K	S	I	K	D	R	L	V	P	I	I	A	D	E	A	R	T	F	G	M	E	G	L	F	R	Q	I	G	I	Y	S	P	E	D	E	K	G	Q	I	L	Q	E	G	I	N	E	L	G	A	G	C	S	W	L	A	A	A	T	S	Y	S	T	N	N	L	P	M	I	P	F
Template Known Secondary structure									T	T		T	T	T	G	G	G						S	S		S	G	G	G	T										B	B				B	T	T			B					S														T					T	S
Template Predicted Secondary structure
Template SS confidence
		499	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure																		.																										.															.
Query SS confidence																		.																										.															.
Query Sequence		V	L	V	T	S	G	P	G	A	T	N	A	I	T	G	I	.	A	T	A	Y	M	D	S	I	P	L	V	V	L	S	G	Q	V	A	T	S	L	I	G	Y	D	.	A	F	Q	E	C	D	M	V	G	I	S	R	P	V	.	V	K	H	S	F	L	V	K	Q	T	E	D	I	P	Q	V	L	K	K	A	F	W
Query Conservation																		.																										.															.
Alig confidence																		.																										.															.
Template Conservation
Template Sequence		Y	I	Y	Y	S	M	F	G	F	Q	R	I	G	D	L	C	W	A	A	G	D	Q	Q	A	R	G	F	L	I	G	G	T	S	G	R	T	T	L	N	G	E	G	L	Q	H	E	D	G	H	S	H	I	Q	S	L	T	I	P	N	C	I	S	Y	D	P	A	Y	A	Y	E	V	A	V	I	M	H	D	G	L	E
Template Known Secondary structure						G	G	G	S														T	T			S						S		S	T	T	T	S	T	T	T		T	T	T			S							T	T	S	T	T							S	S
Template Predicted Secondary structure
Template SS confidence
		596	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	A	S	G	R	P	G	P	V	V	V	D	L	P	K	D	I	L	N	P	A	N	K	L	P	Y
Query Conservation
Alig confidence																		.	.
Template Conservation																		.	.
Template Sequence		R	M	Y	G	E	K	Q	E	N	V	Y	Y	Y	I	T	T	.	.	L	N	E	N	Y	H	M	P	A
Template Known Secondary structure					S	T	T											.	.		S			B
Template Predicted Secondary structure																		.	.
Template SS confidence
		676	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.			.	.	.	.	.	.	.	.	700

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions