Return to main results Retrieve Phyre Job Id

Job DescriptionP00893
Confidence92.99%DateThu Jan 5 10:57:03 GMT 2012
Rank130Aligned Residues166
% Identity12%Templated2ieaa1
SCOP infoThiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) TK-like Pyr module
Resolution1.85

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10......... 20.........30.........40 .........50.........60....... ..70
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Query Sequence  AEMVVRSLIDQGV. . KQVFGYPGGAVLDIYDALHTV. . . . . . . . . GGIDHVLVRHEQAAVHMADGLARATGE. . . . . VGV
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Template Sequence  VRALNVMLKNKSIKDRLVPIIADEARTFGMEGLFRQIGIYSPEDEKGQILQEGINELGAGCSWLAAATSYSTNNLPMIPF
Template Known Secondary structure  TT
TTTGGGSS
SGGGT

BB


BTT

B

S
TTS


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   499500.........510.........520.........530.........540.........550.........560.........570........
 
   71........80...... ...90.........100.........110. ........120..... ....130.........140.......
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Query Sequence  VLVTSGPGATNAITGI. ATAYMDSIPLVVLSGQVATSLIGYD. AFQECDMVGISRPV. VKHSFLVKQTEDIPQVLKKAFW
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Template Sequence  YIYYSMFGFQRIGDLCWAAGDQQARGFLIGGTSGRTTLNGEGLQHEDGHSHIQSLTIPNCISYDPAYAYEVAVIMHDGLE
Template Known Secondary structure  GGGSTT

SS
STTTSTTT
TTT

S
TTSTT

SS
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   596...600.........610.........620.........630.........640.........650.........660.........670.....
 
   148.150.........160.........170....
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Query Sequence  LAASGRPGPVVVDLPKDILNPANKLPY
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Template Sequence  RMYGEKQENVYYYITT. . LNENYHMPA
Template Known Secondary structure  STT




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   676...680.........690. ........700
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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