Job Description P00893 Confidence 94.12% Date Thu Jan 5 10:57:03 GMT 2012 Rank 128 Aligned Residues 158 % Identity 12% Template d2bfdb1 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Branched-chain alpha-keto acid dehydrogenase Pyr module Resolution 1.39

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.				.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																						.	.	.															.
Query SS confidence																						.	.	.															.
Query Sequence		A	E	M	V	V	R	S	L	I	D	Q	G	V	K	Q	V	F	G	Y	P	.	.	.	G	G	A	V	L	D	I	Y	D	A	L	H	T	V	.	G	G	I	D	H	V	L	V	R	H	E	Q	A	A	V	H	M	A	D	G	L	A	R	A	T	G	E	V	G	V	V	L	V	T	S	G	P	G	A	T	N	A
Query Conservation																						.	.	.															.
Alig confidence																						.	.	.															.																													.
Template Conservation																																																																				.
Template Sequence		T	S	A	L	D	N	S	L	A	K	D	P	T	A	V	I	F	G	E	D	V	A	F	G	G	V	F	R	C	T	V	G	L	R	D	K	Y	G	K	D	R	V	F	N	T	P	L	C	E	Q	G	I	V	G	F	G	I	G	I	A	V	T	G	A	T	A	.	I	A	E	I	Q	F	A	D	Y	I	F	P	A
Template Known Secondary structure													T	T						T	T	T	T	T	T		T	T	S	T	T	T	T							T	T	T						S															T	T				.					S	S	G	G	G		G	G	G
Template Predicted Secondary structure																																																																				.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.										.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.																																			.
Query SS confidence											.	.	.	.	.	.	.	.	.																																			.
Query Sequence		I	T	G	I	A	T	A	Y	M	.	.	.	.	.	.	.	.	.	D	S	I	P	L	V	V	L	S	G	Q	V	A	T	S	L	I	G	Y	D	A	F	Q	E	C	D	M	V	G	I	S	R	P	V	.	V	K	H	S	F	L	V	K	Q	T	E	D	I	P	Q	V	L	K	K	A	F	W	L	A	A	S	G
Query Conservation											.	.	.	.	.	.	.	.	.																																			.
Alig confidence											.	.	.	.	.	.	.	.	.																												.							.																							.	.	.	.	.
Template Conservation																																															.																														.	.	.	.	.
Template Sequence		F	D	Q	I	V	N	E	A	A	K	Y	R	Y	R	S	G	D	L	F	N	C	G	S	L	T	I	R	S	P	W	G	C	V	G	H	G	A	L	Y	H	S	Q	S	P	E	.	A	F	F	A	H	C	P	G	I	K	V	V	I	P	R	S	P	F	Q	A	K	G	L	L	L	S	C	I	E	.	.	.	.	.
Template Known Secondary structure							T	T	G	G	G					T	T	T	S	S			T	T								S			S	S		G	G	G	S	S					.					T	S	T	T							S	S														.	.	.	.	.
Template Predicted Secondary structure																																															.																														.	.	.	.	.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	P	G	P	V	V	V	D	L	P	K	D	I	L	N	P	A	N	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	K	N	P	C	I	F	F	E	P	K	I	L	Y	R	A	A	A	E
Template Known Secondary structure		S	S	S								G	G	G	T	T	S
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions