Job Description P00893 Confidence 96.97% Date Thu Jan 5 10:57:03 GMT 2012 Rank 101 Aligned Residues 154 % Identity 13% Template d1w85b1 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Branched-chain alpha-keto acid dehydrogenase Pyr module Resolution 2.0

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.			.	.	.	.							.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																						.	.					.	.	.	.	.	.																.
Query SS confidence																						.	.					.	.	.	.	.	.																.
Query Sequence		E	M	L	S	G	A	E	M	V	V	R	S	L	I	D	Q	G	V	K	Q	.	.	V	F	G	Y	.	.	.	.	.	.	P	G	G	A	V	L	D	I	Y	D	A	L	H	T	V	.	G	G	I	D	H	V	L	V	R	H	E	Q	A	A	V	H	M	A	D	G	L	A	R	A	T	G	E	V	G	V	V	L
Query Conservation																						.	.					.	.	.	.	.	.																.
Alig confidence																						.	.					.	.	.	.	.	.																.																													.
Template Conservation																																																																														.
Template Sequence		A	Q	M	T	M	V	Q	A	I	T	D	A	L	R	I	E	L	K	N	D	P	N	V	L	I	F	G	E	D	V	G	V	N	G	G	V	F	R	A	T	E	G	L	Q	A	E	F	G	E	D	R	V	F	D	T	P	L	A	E	S	G	I	G	G	L	A	I	G	L	A	L	Q	G	F	R	P	.	V	P	E
Template Known Secondary structure																						T	T						T	T		S	T	T			T	T	S	T	T	T	T							T	T	T						S															T	T				.			B
Template Predicted Secondary structure																																																																														.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.		.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90										.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.																																				.
Query SS confidence																				.	.	.	.	.	.	.	.	.																																				.
Query Sequence		V	T	S	G	P	G	A	T	N	A	I	T	G	I	A	T	A	Y	.	.	.	.	.	.	.	.	.	M	D	S	I	P	L	V	V	L	S	G	Q	V	A	T	S	L	I	G	Y	D	A	F	Q	E	C	D	M	V	G	I	S	R	P	V	.	V	K	H	S	F	L	V	K	Q	T	E	D	I	P	Q	V	L
Query Conservation																				.	.	.	.	.	.	.	.	.																																				.
Alig confidence																				.	.	.	.	.	.	.	.	.																.	.																			.
Template Conservation																																												.	.
Template Sequence		I	Q	F	F	G	F	V	Y	E	V	M	D	S	I	C	G	Q	M	A	R	I	R	Y	R	T	G	G	R	Y	H	M	P	I	T	I	R	S	P	F	G	G	G	.	.	V	H	T	P	E	L	H	S	D	S	L	E	G	L	V	A	Q	Q	P	G	L	K	V	V	I	P	S	T	P	Y	D	A	K	G	L	L
Template Known Secondary structure			S	S	G	G	G	G	G	G	T						T	T	G	G	G					T	T	T	S	S												S	S	.	.	S				T	T	S	S								T	T	S	T	T							S	S
Template Predicted Secondary structure																																												.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.			.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	A	F	W	L	A	A	S	G	R	P	G	P	V	V	V	D	L	P	K
Query Conservation
Alig confidence							.	.	.	.	.
Template Conservation							.	.	.	.	.
Template Sequence		I	S	A	I	R	.	.	.	.	.	D	N	D	P	V	I	F	L	E	H	L
Template Known Secondary structure							.	.	.	.	.	S	S	S								T
Template Predicted Secondary structure							.	.	.	.	.
Template SS confidence
		158	.	160	.	.						.	.	.	.	.	.	.	170	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions