Return to main results Retrieve Phyre Job Id

Job DescriptionP00893
Confidence99.97%DateThu Jan 5 10:57:03 GMT 2012
Rank51Aligned Residues160
% Identity39%Templated1t9ba1
SCOP infoDHS-like NAD/FAD-binding domain DHS-like NAD/FAD-binding domain Pyruvate oxidase and decarboxylase, middle domain
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   197..200.........210....... ..220.........230.........240.........250.........260.........270.....
Predicted Secondary structure 







.































Query SS confidence 




















.

























































Query Sequence  KRALQTLVAAKKPVVYVGGGA. ITAGCHQQLKETVEALNLPVVCSLMGLGAFPATHRQALGMLGMHGTYEANMTMHNADV
Query Conservation        
  
 




 
 
 .        
  


 
  

              
   
  
          
  

 
Alig confidence 




















.

























































Template Conservation 
 
   
  






 
 
  
   
   
  


  
 

  
   

     

   
  
          
  


Template Sequence  NKAADLINLAKKPVLYVGAGILNHADGPRLLKELSDRAQIPVTTTLQGLGSFDQEDPKSLDMLGMHGCATANLAVQNADL
Template Known Secondary structure 
T
SS
GGGGGSTTTT


GGGTTSS
TTSTT
STTS

S
Template Predicted Secondary structure 






































Template SS confidence 















































































   290.........300.........310.........320.........330.........340.........350.........360.........
 
   276...280.........290.. .......300.........310.........320.........330.........340......
Predicted Secondary structure 












.........























Query SS confidence 
















. . . . . . . . .





















































Query Sequence  IFAVGVRFDDRTTNNLA. . . . . . . . . KYCPNATVLHIDIDPTSISKTVTADIPIVGDARQVLEQMLELLSQESAHQPLDE
Query Conservation 

 

  
         .........        
 
  
             
  
    
  
   
           
Alig confidence 
















.........
















































.....
Template Conservation 

 

               
            

 

 
          
  
 

    
  
   
      .....
Template Sequence  IIAVGARFDDRVTGNISKFAPEARRAAAEGRGGIIHFEVSPKNINKVVQTQIAVEGDATTNLGKMMSKIFPVKER. . . . .
Template Known Secondary structure  S



TTTS
SGGGSSTTS
S
GGGSSSSS

SS
TTS





.....
Template Predicted Secondary structure 











































.....
Template SS confidence 















































































   370.........380.........390.........400.........410.........420.........430.........440....
 
   347..350.........360..
Predicted Secondary structure 
Query SS confidence 















Query Sequence  IRDWWQQIEQWRARQC
Query Conservation                  
Alig confidence  .














Template Conservation  .  
       
    
Template Sequence  . SEWFAQINKWKKEYP
Template Known Secondary structure  .S
Template Predicted Secondary structure  .

Template SS confidence 















   445....450.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions