 |
Job Description | P00893 | Confidence | 95.92% | Date | Thu Jan 5 10:57:03 GMT 2012 |
Rank | 118 | Aligned Residues | 67 |
% Identity | 24% | Template | d1s5pa_ |
SCOP info | DHS-like NAD/FAD-binding domain
| DHS-like NAD/FAD-binding domain
| Sir2 family of transcriptional regulators
|
Resolution | 1.96 |
|
 |
  |   |
264 | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | |
|
. | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | E | A | N | M | T | M | H | N | A | D | V | I | F | A | V | G | V | R | F | D | D | R | T | T | N | N | L | A | K | Y | C | . |
. |
P | N | A | T | V | L | H | I | D | I | D | P | T | S | I | S | K | T | V | T | A | D | I | P | I | V | G | D | A | R | Q | V | L | E | Q | M | L | E | L | L |
Query Conservation |   |
  |   |   |   |   |   |
|   |   |
|
|   |
|
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   | . | . |   |   |   |   |   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|   |   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|   |
|   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|
|   |
|
|   |   |   |   | . | . | . | . | . |   |   |   |   |   |   |   |   |
|   |   |   |
|
|
|   |   |
|   |   |   |
|
Template Sequence |   |
D | E | I | Y | M | A | L | S | M | A | D | I | F | I | A | I | G | T | S | G | H | V | Y | P | A | A | G | F | V | H | E | A | K | L | H | G | A | H | T | V | E | L | N | L | E | P | S | . |
. |
. |
. |
. |
Q | E | F | A | E | K | Y | Y | G | P | A | S | Q | V | V | P | E | F | V | E | K | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |
| S |  |  |  |  |  | S |
|
| T | T | S | T | T | G | G | G |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  | S | S | S |
| . | . | . | . | . |
|
|
| S |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
| . | . | . | . | . |
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
198 | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | |
|
|
|
|
. | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|