 |
Job Description | P00893 | Confidence | 97.78% | Date | Thu Jan 5 10:57:03 GMT 2012 |
Rank | 94 | Aligned Residues | 109 |
% Identity | 15% | Template | d1r9ja1 |
SCOP info | Thiamin diphosphate-binding fold (THDP-binding)
| Thiamin diphosphate-binding fold (THDP-binding)
| TK-like Pyr module
|
Resolution | 2.22 |
|
 |
  |   |
51 | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | |
. | . | . | . | . | . | . | . | 120 | . | . | . | . | . | |
. | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
| . |
|
|
|
|
|
|  |  |  |  |  |  |  |  | . |
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
Query Sequence |   |
E | Q | A | A | V | H | M | A | D | G | L | A | R | A | T | G | E | V | G | V | V | L | V | T | S | G | P | G | A | T | N | A | I | T | G | I | A | T | A | Y | M | D | S | I | P | L | V | V | L | S | G | Q | V | A | T | S | L | I | G | Y | D | . |
A | F | Q | E | C | D | M | V | G | I | S | R | P | V | . |
V | K | H |
Query Conservation |   |
|   |   |
|   |   |   |
|   |
|
|
|   |   |   |
|   |   |   |
|   |   |   |
|   |
|
|
|   |   |
|   |   |   |   |
|   |   |
|   |   |   |   |   |
|
|
|   |
|   |
|   |   |
|   |   |   |   |
|   |   | . |   |   |
|   |   |
|   |   |   |   |   |   |   |   | . |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
Template Conservation |   |
|   |   |
|
|
|   |
|   |
|
|
|   |   |
|
|   |   | . |
|   |   |   |   |
|   |   |
|   |   |
|
|   |   |
|
|
|   |   |
|   |   |   |   |   |
|   |   |
|   |   |   |   |
|   |   |   |
|   |   |
|   |
|
|
|   |   |
|
|
|
|   |
|
|   |
|
|   |
|   |
Template Sequence |   |
E | H | A | M | C | A | I | L | N | G | L | D | A | H | D | G | I | I | . |
P | F | G | G | T | F | L | N | F | I | G | Y | A | L | G | A | V | R | L | A | A | I | S | H | H | R | V | I | Y | V | A | T | H | D | S | I | G | V | G | E | D | G | P | T | H | Q | P | V | E | L | V | A | A | L | R | A | M | P | N | L | Q |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S |
|  | . |  |  |  |  |  |  | G | G | G | G | G | G | G |  |  |  |  |  |  |  |  |  |  | T |
|
|
|  |  |  |  |  |
|
| S | G | G | G |
| T | T |
| T | T | T |
|
| S | S |  |  |  |  |  |  |  | S | T | T |
|  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
409 | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | |
. | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . |
  |
  |   |
129 | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | F | L | V | K | Q | T | E | D | I | P | Q | V | L | K | K | A | F | W | L | A | A | S | G | R | P | G | P | V | V | V | D | L | P | K | D |
Query Conservation |   |
  |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |
|
|
|   |
|   |
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |
|   |   |
|   |   |   |   |
|   |   |
|
|   | . | . | . | . |   |   |   |   |
|
|   |
|   |
|   |
|   |
Template Sequence |   |
V | I | R | P | S | D | Q | T | E | T | S | G | A | W | A | V | A | L | S | . |
. |
. |
. |
S | I | H | T | P | T | V | L | C | L | S | R | Q |
Template Known Secondary structure |   |
 |  |
|
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |
| T | T |
|
|  |  |  |  |
|
| S | S |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |
|
|
|
|
|  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
488 | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | |
|
|
|
. | . | . | 510 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|