Return to main results Retrieve Phyre Job Id

Job DescriptionP00893
Confidence100.00%DateThu Jan 5 10:57:03 GMT 2012
Rank38Aligned Residues192
% Identity24%Templated1ozha3
SCOP infoThiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Pyruvate oxidase and decarboxylase PP module
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   368.370.........380.........390.........400.........410.........420.........430.........440.......
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Query Sequence  HSEKIKPQAVIETLWRLTKGDAYVTSDVGQHQMFAALYYPFDKPRRWINSGGLGTMGFGLPAALGVKMALPEETVVCVTG
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Template Sequence  NQFALHPLRIVRAMQDIVNSDVTLTVDMGSFHIWIARYLYTFRARQVMISNGQQTMGVALPWAIGAWLVNPERKVVSVSG
Template Known Secondary structure 

SSB


TT
SSTGGG


S


TT

TT
STTS
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   367..370.........380.........390.........400.........410.........420.........430.........440......
 
   448.450.........460.........470.........480.........490.........500.........510.........520.......
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Query Sequence  DGSIQMNIQELSTALQYELPVLVVNLNNRYLGMVKQWQDMIYSGRHSQSYMQSLPDFVRLAEAYGHVGIQISHPHELESK
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Template Sequence  DGGFLQSSMELETAVRLKANVLHLIWVDNGYNMVAIQEEKK. . YQRLSGVEFGPMDFKAYAESFGAKGFAVESAEALEPT
Template Known Secondary structure  TTT


SB
..SS

S
B




TTTS

SGGG
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   447..450.........460.........470.........480....... ..490.........500.........510.........520....
 
   528.530.........540.........550.........560......
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Query Sequence  LSEALEQVRNNRLVFVDVTVDGSEHVYPMQIRGGGMDEM
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Template Sequence  LRAAMD. . . VDGPAVVAIPVDYRDN. . PLLMGQLHLSQI
Template Known Secondary structure  ...SSS
B

TT..TTSGGGT
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   525....530 .........540...... ...550........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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