Job Description P00893 Confidence 86.05% Date Thu Jan 5 10:57:03 GMT 2012 Rank 141 Aligned Residues 146 % Identity 16% Template d1ik6a1 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Branched-chain alpha-keto acid dehydrogenase Pyr module Resolution 2.00

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.				.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.																																		.
Query SS confidence																.	.	.																																		.
Query Sequence		M	L	S	G	A	E	M	V	V	R	S	L	I	D	.	.	.	Q	G	V	K	Q	V	F	G	Y	P	G	G	A	V	L	D	I	Y	D	A	L	H	T	V	G	G	I	D	H	V	L	V	R	.	H	E	Q	A	A	V	H	M	A	D	G	L	A	R	A	T	G	E	V	G	V	V	L	V	T	S	G	P	G
Query Conservation																.	.	.																																		.
Alig confidence																.	.	.															.	.	.	.																.																												.	.
Template Conservation																																	.	.	.	.																																												.	.
Template Sequence		M	A	N	M	A	K	A	I	N	M	A	L	H	E	E	M	E	R	D	E	R	V	V	V	L	G	E	L	V	T	E	.	.	.	.	G	L	Y	E	R	F	G	P	E	R	V	I	D	T	P	L	N	E	G	G	I	L	G	F	A	M	G	M	A	M	A	G	L	K	P	V	A	E	I	Q	F	V	L	.	.
Template Known Secondary structure																					T	T								T	T	T	.	.	.	.	T							T	T	T						S															T	T												.	.
Template Predicted Secondary structure																																	.	.	.	.																																												.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.					.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.
Query SS confidence																																																	.
Query Sequence		A	T	N	A	I	T	G	I	A	T	A	Y	M	D	S	I	P	L	V	V	L	S	G	Q	V	A	T	S	L	I	G	Y	D	A	F	Q	E	C	D	M	V	G	I	S	R	P	V	.	V	K	H	S	F	L	V	K	Q	T	E	D	I	P	Q	V	L	K	K	A	F	W	L	A	A	S	G	R	P	G	P	V
Query Conservation																																																	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.							.																							.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.
Template Sequence		G	A	D	E	L	L	N	H	I	A	K	L	R	Y	K	A	P	L	V	V	R	T	P	V	G	S	P	E	.	.	.	.	.	.	.	.	.	.	.	.	.	A	I	F	V	H	T	P	G	L	V	V	V	M	P	S	T	P	Y	N	A	K	G	L	L	K	A	A	I	R	.	.	.	.	.	G	D	D	P	V
Template Known Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.					T		T	T								S														.	.	.	.	.	S	S	S
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.														.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150						.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	D	L	P	K	D	I	L	N	P	A	N	K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	F	L	E	P	K	I	L	Y	R	A	P	R	E	E
Template Known Secondary structure							G	G	G	S	S
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions