Job Description P00893 Confidence 99.31% Date Thu Jan 5 10:57:03 GMT 2012 Rank 77 Aligned Residues 114 % Identity 19% Template c3m7iA_ PDB info PDB header:transferase Chain: A: PDB Molecule:transketolase; PDBTitle: crystal structure of transketolase in complex with thiamine2 diphosphate, ribose-5-phosphate(pyranose form) and3 magnesium ion Resolution 1.75 Å

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		419	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.												.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.			.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.																			.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.																			.	.
Query Sequence		G	L	G	T	M	G	F	G	L	P	A	A	L	G	V	K	M	A	L	P	.	.	.	.	.	.	.	.	.	.	.	E	E	T	V	V	C	V	T	G	D	G	S	I	Q	M	N	I	Q	.	.	E	L	S	T	A	L	Q	Y	E	L	P	V	L	V	V	N	L	N	N	R	Y	L	G	M	V	K	Q	W	Q
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.																			.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.																			.	.
Template Conservation
Template Sequence		A	T	G	P	L	G	Q	G	V	A	N	A	V	G	F	A	X	A	A	K	K	A	Q	N	L	L	G	S	D	L	I	D	H	K	I	Y	C	L	C	G	D	G	D	L	Q	E	G	I	S	Y	E	A	C	S	L	A	G	L	H	K	L	D	N	F	I	L	I	Y	D	S	N	N	I	S	I	E	G	D	V	G
Template Known Secondary structure					S	T	T																						T	T	T																S													T	T		T	T									S			T	T			G	G
Template Predicted Secondary structure
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		486	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.			.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.
Query SS confidence																																			.	.
Query Sequence		D	M	I	Y	S	G	R	H	S	Q	S	Y	M	Q	S	L	P	D	F	V	R	L	A	E	A	Y	G	H	V	G	I	Q	I	.	.	S	H	P	H	E	L	E	S	K	L	S	E	A	L	E	Q	V	R	N	N	R	L	V	F	V	D	V	T	V
Query Conservation																																			.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.																			.	.																.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.
Template Sequence		L	A	F	.	.	.	.	.	.	.	.	.	.	.	.	N	E	N	V	K	X	R	F	E	A	Q	G	F	E	V	L	S	I	N	G	H	D	Y	E	E	I	N	K	A	L	E	Q	A	K	K	.	.	.	S	T	K	P	C	L	I	I	A	K	T
Template Known Secondary structure		G	T		.	.	.	.	.	.	.	.	.	.	.	.											T	T								T	T														T	.	.	.		S	S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.
Template SS confidence
		192	.	.													.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.				230	.	.	.	.	.	.	.	.	.	240

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions