Job Description P00893 Confidence 100.00% Date Thu Jan 5 10:57:03 GMT 2012 Rank 7 Aligned Residues 522 % Identity 29% Template c3eyaE_ PDB info PDB header:oxidoreductase Chain: E: PDB Molecule:pyruvate dehydrogenase [cytochrome]; PDBTitle: structural basis for membrane binding and catalytic2 activation of the peripheral membrane enzyme pyruvate3 oxidase from escherichia coli Resolution 2.50 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	E	M	L	S	G	A	E	M	V	V	R	S	L	I	D	Q	G	V	K	Q	V	F	G	Y	P	G	G	A	V	L	D	I	Y	D	A	L	H	T	V	G	G	I	D	H	V	L	V	R	H	E	Q	A	A	V	H	M	A	D	G	L	A	R	A	T	G	E	V	G	V	V	L	V	T	S	G	P	G	A	T
Query Conservation
Alig confidence					.
Template Conservation					.
Template Sequence		M	K	Q	.	T	V	A	A	Y	I	A	K	T	L	E	S	A	G	V	K	R	I	W	G	V	T	G	D	S	L	N	G	L	S	D	S	L	N	R	M	G	T	I	E	W	M	S	T	R	H	E	E	V	A	A	F	A	A	G	A	E	A	Q	L	S	G	E	L	A	V	C	A	G	S	C	G	P	G	N	L
Template Known Secondary structure					.	B												T	T										G	G	G												S	S						S	S																S	S								T	T
Template Predicted Secondary structure					.
Template SS confidence
		1	.	.		.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	I	T	G	I	A	T	A	Y	M	D	S	I	P	L	V	V	L	S	G	Q	V	A	T	S	L	I	G	Y	D	A	F	Q	E	C	D	M	V	G	I	S	R	P	V	V	K	H	S	F	L	V	K	Q	T	E	D	I	P	Q	V	L	K	K	A	F	W	L	A	A	S	G	R	P	G	P	V	V	V	D
Query Conservation
Alig confidence																																																																											.
Template Conservation																																																																											.
Template Sequence		H	L	I	N	G	L	F	D	C	H	R	N	H	V	P	V	L	A	I	A	A	H	I	P	S	S	E	I	G	S	G	Y	F	Q	E	T	H	P	Q	E	L	F	R	E	C	S	H	Y	C	E	L	V	S	S	P	E	Q	I	P	Q	V	L	A	I	A	M	R	K	A	V	L	N	R	.	G	V	S	V	V	V
Template Known Secondary structure		T	T										T	T										S		G	G	G	T	T	S			T	T								T	S	T	T		S							S	G	G	G															T	T	.	S
Template Predicted Secondary structure																																																																											.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.		.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	K	D	I	L	N	P	A	N	K	L	P	Y	V	W	P	E	S	V	S	M	R	S	Y	N	P	T	T	T	G	H	K	G	Q	I	K	R	A	L	Q	T	L	V	A	A	K	K	P	V	V	Y	V	G	G	G	A	I	T	A	G	C	H	Q	Q	L	K	E	T	V	E	A	L	N	L	P	V	V	C	S
Query Conservation
Alig confidence															.	.	.																																											.	.
Template Conservation															.	.	.																																											.	.
Template Sequence		L	P	G	D	V	A	L	K	P	A	P	E	G	.	.	.	A	T	M	H	W	Y	H	A	P	Q	P	V	V	T	P	E	E	E	E	L	R	K	L	A	Q	L	L	R	Y	S	S	N	I	A	L	M	C	G	S	G	C	A	.	.	G	A	H	K	E	L	V	E	F	A	G	K	I	K	A	P	I	V	H	A
Template Known Secondary structure								T	S	B			T	T	.	.	.																													T			S							G	G	G	T	.	.	T													T
Template Predicted Secondary structure															.	.	.																																											.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.				.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.			.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	G	L	G	A	F	P	A	T	H	R	Q	A	L	G	M	L	G	M	H	G	T	Y	E	A	N	M	T	M	H	N	A	D	V	I	F	A	V	G	V	R	F	D	D	R	T	T	N	N	L	A	K	Y	C	P	N	A	T	V	L	H	I	D	I	D	P	T	S	I	S	K	T	V	T	A	D	I	P	I
Query Conservation
Alig confidence																																																		.	.	.	.	.
Template Conservation																																																		.	.	.	.	.
Template Sequence		L	R	G	K	E	H	V	E	Y	D	N	P	Y	D	V	G	M	T	G	L	I	G	F	S	S	G	F	H	T	M	M	N	A	D	T	L	V	L	L	G	T	Q	F	P	Y	R	A	F	.	.	.	.	.	Y	P	T	D	A	K	I	I	Q	I	D	I	N	P	A	S	I	G	A	H	S	K	V	D	M	A	L
Template Known Secondary structure		G	G	G					S	S	S		T	T	B					S	T	T	S												S						S						G	G	G	.	.	.	.	.	S		S	S	S							S		G	G	G	T	T	S	S	S			S
Template Predicted Secondary structure																																																		.	.	.	.	.
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.						.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	D	A	R	Q	V	L	E	Q	M	L	E	L	L	S	Q	E	S	A	H	Q	P	L	D	E	I	R	D	W	W	Q	Q	I	E	Q	W	R	A	R	Q	C	L	K	Y	D	T	H	S	E	K	I	K	P	Q	A	V	I	E	T	L	W	R	L	T	K	G	D	A	Y	V	T	S	D	V	G	Q	H	Q	M
Query Conservation
Alig confidence																			.	.	.
Template Conservation																			.	.	.
Template Sequence		V	G	D	I	K	S	T	L	R	A	L	L	P	L	V	E	E	.	.	.	K	A	D	R	K	F	L	D	K	A	L	E	D	Y	R	D	A	R	K	G	L	D	D	L	A	K	P	S	E	K	A	I	H	P	Q	Y	L	A	Q	Q	I	S	H	F	A	A	D	D	A	I	F	T	C	D	V	G	T	P	T	V
Template Known Secondary structure													G	G	G	S			.	.	.																									S				S	S		B													S		T	T							T	T
Template Predicted Secondary structure																			.	.	.
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.				.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	A	L	Y	Y	P	F	D	K	P	R	R	W	I	N	S	G	G	L	G	T	M	G	F	G	L	P	A	A	L	G	V	K	M	A	L	P	E	E	T	V	V	C	V	T	G	D	G	S	I	Q	M	N	I	Q	E	L	S	T	A	L	Q	Y	E	L	P	V	L	V	V	N	L	N	N	R	Y	L	G	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	A	A	R	Y	L	K	M	N	G	K	R	R	L	L	G	S	F	N	H	G	S	M	A	N	A	M	P	Q	A	L	G	A	Q	A	T	E	P	E	R	Q	V	V	A	M	C	G	D	G	G	F	S	M	L	M	G	D	F	L	S	V	V	Q	M	K	L	P	V	K	I	V	V	F	N	N	S	V	L	G	G
Template Known Secondary structure											S	S							T	T	T			T	T													S	T	T	S														T	G	G	G							T	T											S	B
Template Predicted Secondary structure
Template SS confidence
		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.
		481	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	Q	W	Q	D	M	I	Y	S	G	R	H	S	Q	S	Y	M	Q	S	L	P	D	F	V	R	L	A	E	A	Y	G	H	V	G	I	Q	I	S	H	P	H	E	L	E	S	K	L	S	E	A	L	E	Q	V	R	N	N	R	L	V	F	V	D	V	T	V	D	G	S	E	H	V	Y	P	M
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	E	L	H	D	T	N	F	A	R	I	A	E	A	C	G	I	T	G	I	R	V	E	K	A	S	E	V	D	E	A	L	Q	R	A	F	S	.	.	.	I	D	G	P	V	L	V	D	V	V	V	A	K	E	E	L	A	I	P	P
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		B													T	T	S							S	G	G	G											.	.	.	S	S	S								B					S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.
Template SS confidence
																		480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.				.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.