Return to main results Retrieve Phyre Job Id

Job DescriptionP00893
Confidence46.25%DateThu Jan 5 10:57:03 GMT 2012
Rank186Aligned Residues59
% Identity20%Templatec3dmdA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:signal recognition particle receptor; PDBTitle: structures and conformations in solution of the signal recognition2 particle receptor from the archaeon pyrococcus furiosus
Resolution2.21 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   187..190.........200.........210.........220.........230.........240.....
Predicted Secondary structure 
























Query SS confidence 


























































Query Sequence  PTTTGHKGQIKRALQTLVAAKKPVVYVGGGAITAGCHQQLKETVEALNLPVVCSLMGLG
Query Conservation           
      
  
 




 
 
         
  


 
  

        
Alig confidence 


























































Template Conservation    
 




  


      
  
  
  
  
  
  

   
    
         
Template Sequence  FNGSGKTTTIAKLANWLKNHGFSVVIAASDTFRAGAIEQLEEHAKRIGVKVIKHSYGAD
Template Known Secondary structure 
TTSSTT


TT
TT


STT

Template Predicted Secondary structure 























Template SS confidence 


























































   131........140.........150.........160.........170.........180.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions