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Job DescriptionP00893
Confidence100.00%DateThu Jan 5 10:57:03 GMT 2012
Rank8Aligned Residues541
% Identity24%Templatec2q27B_
PDB info PDB header:lyaseChain: B: PDB Molecule:oxalyl-coa decarboxylase; PDBTitle: crystal structure of oxalyl-coa decarboxylase from escherichia coli
Resolution2.12 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MEMLSGAEMVVRSLIDQGVKQVFGYPGGAVLDIYDALHTVGGIDHVLVRHEQAAVHMADGLARATGEVGVVLVTSGPGAT
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Template Sequence  LQMTDGMHIIVEALKQNNIDTIYGVVGIPVTDMARHAQAE. GIRYIGFRHEQSAGYAAAASGFLTQKPGICLTVSAPGFL
Template Known Secondary structure 

TT




TTTT.T

SSSS

S
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   5....10.........20.........30.........40.... .....50.........60.........70.........80...
 
   81........90.........100....... ..110.........120.........130.........140.........150........
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Query Sequence  NAITGIATAYMDSIPLVVLSGQVATSL. . IGYDAFQECDMVGISRPVVKHSFLVKQTEDIPQVLKKAFWLAASGRPGPVV
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Template Sequence  NGLTALANATVNGFPMIMISGSSDRAIVDLQQGDYEELDQMNAAKPYAKAAFRVNQPQDLGIALARAIRVSVSGRPGGVY
Template Known Secondary structure  T



TTS

TT


GGGSS

SGGGSSS

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   84.....90.........100.........110.........120.........130.........140.........150.........160...
 
   159160.........170.........180.........190.........200.........210.........220.........230........
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Query Sequence  VDLPKDILNPANKLPYVWPESVSMRSYNPTTTGHKGQIKRALQTLVAAKKPVVYVGGGAITAGCHQQLKETVEALNLPVV
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Template Sequence  LDLPANVLAATMEKDEALTTIVKVENPSPALLPCPKSVTSAISLLAKAERPLIILGKGAAYSQADEQLREFIESAQIPFL
Template Known Secondary structure 
TT



SSSS





T
SS
T
TT

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   164.....170.........180.........190.........200.........210.........220.........230.........240...
 
   239240.........250.........260.........270.........280.........290.........300.........310........
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Query Sequence  CSLMGLGAFPATHRQALGMLGMHGTYEANMTMHNADVIFAVGVRFDDRTTNNLAKYCPNATVLHIDIDPTSISKTVTADI
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Template Sequence  PMSMAKGILEDTHPLSAAAAR. . . . . . . SFALANADVVMLVGARLNWLLAHGKKGWAADTQFIQLDIEPQEIDSNRPIAV
Template Known Secondary structure 
GGGTTSS
TT
TTB
GGG.......
SS


SGGGGGGTTTS
TT
S
GGGTTSSS

S
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   244.....250.........260.... .....270.........280.........290.........300.........310......
 
   319320.........330.........340.........350.........360.........370.........380........ .390......
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Query Sequence  PIVGDARQVLEQMLELLSQESAHQPLDEIRDWWQQIEQWRARQCLKYDTHSEKIKPQAVIETLWRLTKGD. . AYVTSDVG
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Template Conservation   
  
    
  
   
                                             
   
       
     
Template Sequence  PVVGDIASSMQGMLAELKQNTFTTPLVWRDILNIHKQQNAQKMHEKLSTDTQPLNYFNALSAVRDVLRENQDIYLVNEGA
Template Known Secondary structure  S
T







SSB
T
TT
SS
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   317..320.........330.........340.........350.........360.........370.........380.........390......
 
   397..400.........410.........420.........430.........440.........450.........460.........470......
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Query Sequence  QHQMFAALYYPFDKPRRWINSGGLGTMGFGLPAALGVKMALPEETVVCVTGDGSIQMNIQELSTALQYELPVLVVNLNNR
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Template Sequence  NTLDNARNIIDMYKPRRRLDCGTWGVMGIGMGYAIGASVT. SGSPVVAIEGDSAFGFSGMEIETICRYNLPVTIVIFNNG
Template Known Secondary structure  S


SSS
STTTT
TT
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TTTGGGT


S
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   397..400.........410.........420.........430...... ...440.........450.........460.........470.....
 
   477..480.........490.........500.........510.........520.........530.........540.........550....
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Query Sequence  YLGMVKQWQDMIYSGRHSQSYMQSLPDFVRLAEAYGHVGIQISHPHELESKLSEALEQVRNNRLVFVDVTVDGSEHVY
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Template Sequence  GIYRG. DGVDLSGAGAPSPTDLLHHARYDKLMDAFRGVGYNVTTTDELRHALTTGIQS. . . RKPTIINVVIDPAAGTE
Template Known Secondary structure  BSS
S.



TTSS



TTB

TT

GGGGGGGGT

S...TS
B
TTS


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   476...480 .........490.........500.........510.........520.........530.. .......540.........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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