Job Description P00893 Confidence 34.04% Date Thu Jan 5 10:57:03 GMT 2012 Rank 206 Aligned Residues 145 % Identity 13% Template c2pjuD_ PDB info PDB header:transcription Chain: D: PDB Molecule:propionate catabolism operon regulatory protein; PDBTitle: crystal structure of propionate catabolism operon2 regulatory protein prpr Resolution 2.10 Å

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		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.			.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450
Predicted Secondary structure																		.	.
Query SS confidence																		.	.
Query Sequence		K	P	Q	A	V	I	E	T	L	W	R	L	T	K	G	D	.	.	A	Y	V	T	S	D	V	G	Q	H	Q	M	F	A	A	L	Y	Y	P	F	D	K	P	R	R	W	I	N	S	G	G	L	G	T	M	G	F	G	L	P	A	A	L	G	V	K	M	A	L	P	E	E	T	V	V	C	V	T	G	D	G	S
Query Conservation																		.	.
Alig confidence																		.	.																	.	.	.																			.	.	.	.	.	.	.
Template Conservation																																				.	.	.																			.	.	.	.	.	.	.
Template Sequence		G	F	E	K	A	V	T	Y	I	R	K	K	L	A	N	E	R	C	D	A	I	I	A	A	G	S	N	G	A	Y	L	K	S	R	.	.	.	L	S	V	P	V	I	L	I	K	P	S	G	Y	D	V	L	Q	F	.	.	.	.	.	.	.	L	A	K	A	G	K	L	T	S	S	I	G	V	V	T	Y	Q	E
Template Known Secondary structure															T	T				S														T	T	.	.	.		S	S																.	.	.	.	.	.	.				T	T		T	T	S								S	S
Template Predicted Secondary structure																																				.	.	.																			.	.	.	.	.	.	.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.				.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.								.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		451	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Q	M	N	I	Q	E	L	S	T	A	L	Q	Y	E	L	P	V	L	V	V	N	L	N	N	R	Y	L	G	M	V	K	Q	W	Q	D	M	I	Y	S	G	R	H	S	Q	S	Y	M	Q	S	L	P	D	F	V	R	L	A	E	A	Y	G	H	V	G	I	Q	I	S	H	P	H	E	L	E	S	K	L	S	E
Query Conservation
Alig confidence														.	.													.															.	.	.
Template Conservation														.	.													.															.	.	.
Template Sequence		T	I	P	A	L	V	A	F	Q	K	T	F	.	.	N	L	R	L	D	Q	R	S	Y	I	T	E	.	E	D	A	R	G	Q	I	N	E	L	K	A	N	G	.	.	.	T	E	A	V	V	G	A	G	L	I	T	D	L	A	E	E	A	G	M	T	G	I	F	I	Y	S	A	A	T	V	R	Q	A	F	S	D
Template Known Secondary structure														.	.	T									S	S		.													T	T	.	.	.							S										T	T	S					S	S
Template Predicted Secondary structure														.	.													.															.	.	.
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.			.	.	.	130	.	.	.	.	.	.	.	.		.	140	.	.	.	.	.	.	.	.	.	150	.	.				.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		531	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		189	190	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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