Job Description P00893 Confidence 100.00% Date Thu Jan 5 10:57:03 GMT 2012 Rank 4 Aligned Residues 557 % Identity 32% Template c2panF_ PDB info PDB header:lyase Chain: F: PDB Molecule:glyoxylate carboligase; PDBTitle: crystal structure of e. coli glyoxylate carboligase Resolution 2.70 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																																	.
Query SS confidence																																																																	.
Query Sequence		M	L	S	G	A	E	M	V	V	R	S	L	I	D	Q	G	V	K	Q	V	F	G	Y	P	G	G	A	V	L	D	I	Y	D	A	L	H	T	V	G	G	I	D	H	V	L	V	R	H	E	Q	A	A	V	H	M	A	D	G	L	A	R	A	T	.	G	E	V	G	V	V	L	V	T	S	G	P	G	A	T	N
Query Conservation																																																																	.
Alig confidence																																																																	.
Template Conservation
Template Sequence		K	X	R	A	V	D	A	A	X	Y	V	L	E	K	E	G	I	T	T	A	F	G	V	P	G	A	A	I	N	P	F	Y	S	A	X	R	K	H	G	G	I	R	H	I	L	A	R	H	V	E	G	A	S	H	X	A	E	G	Y	T	R	A	T	A	G	N	I	G	V	C	L	G	T	S	G	P	A	G	T	D
Template Known Secondary structure																T	T										G	G	G																			S	S															S	T	T									S	T					T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	T	G	I	A	T	A	Y	M	D	S	I	P	L	V	V	L	S	G	Q	V	A	T	S	L	I	G	Y	D	A	F	Q	E	C	D	M	V	G	I	S	R	P	V	V	K	H	S	F	L	V	K	Q	T	E	D	I	P	Q	V	L	K	K	A	F	W	L	A	A	S	G	R	P	G	P	V	V	V	D	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		X	I	T	A	L	Y	S	A	S	A	D	S	I	P	I	L	C	I	T	G	Q	A	P	R	A	R	L	H	K	E	D	F	Q	A	V	D	I	E	A	I	A	K	P	V	S	K	X	A	V	T	V	R	E	A	A	L	V	P	R	V	L	Q	Q	A	F	H	L	X	R	S	G	R	P	G	P	V	L	V	D	L
Template Known Secondary structure		S										T	T												G	G	G	T	T	T	T		T	T									G	G	G	S	S							S	G	G	G														S	S	S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	K	D	I	L	N	P	A	N	K	L	P	Y	V	W	P	E	S	V	S	M	R	S	Y	N	P	T	T	T	G	H	K	G	Q	I	K	R	A	L	Q	T	L	V	A	A	K	K	P	V	V	Y	V	G	G	G	A	I	T	A	G	C	H	Q	Q	L	K	E	T	V	E	A	L	N	L	P	V	V	C	S	L
Query Conservation
Alig confidence														.	.	.	.
Template Conservation														.	.	.	.
Template Sequence		P	F	D	V	Q	V	A	E	I	E	F	D	.	.	.	.	P	D	X	Y	E	P	L	P	V	Y	K	P	A	A	S	R	X	Q	I	E	K	A	V	E	X	L	I	Q	A	E	R	P	V	I	V	A	G	G	G	V	I	N	A	D	A	A	A	L	L	Q	Q	F	A	E	L	T	S	V	P	V	I	P	T	L
Template Known Secondary structure								S						.	.	.	.	G	G	G																									T		S	S												T	T													T							T
Template Predicted Secondary structure														.	.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.					.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.		.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		M	G	L	G	A	F	P	A	T	H	R	Q	A	L	G	M	L	G	M	H	.	G	T	Y	E	A	N	M	T	M	H	N	A	D	V	I	F	A	V	G	V	R	F	D	D	R	T	T	N	N	L	A	K	Y	C	P	N	A	T	V	L	H	I	D	I	D	P	T	S	I	S	K	T	V	T	A	D	I	P	I
Query Conservation																						.
Alig confidence																						.
Template Conservation
Template Sequence		X	G	W	G	C	I	P	D	D	H	E	L	X	A	G	X	V	G	L	Q	T	A	H	R	Y	G	N	A	T	L	L	A	S	D	X	V	F	G	I	G	N	R	F	A	N	R	H	T	G	S	V	E	K	Y	T	E	G	R	K	I	V	H	I	D	I	E	P	T	Q	I	G	R	V	L	C	P	D	L	G	I
Template Known Secondary structure		T	T	T	T	S	S		T	T	S	T	T	B					S	S	S	S													S						S									S	S						T	T								S		G	G	G	T	T	S	S	S			S	S
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	D	A	R	Q	V	L	E	Q	M	L	E	L	L	S	Q	E	S	A	H	Q	P	L	D	E	I	R	D	W	W	Q	Q	I	E	Q	W	R	A	R	Q	C	L	K	Y	D	T	H	S	E	K	I	K	P	Q	A	V	I	E	T	L	W	R	L	T	K	G	D	A	Y	V	T	S	D	V	G	Q	H	Q	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	S	D	A	K	A	A	L	T	L	L	V	E	V	A	Q	E	X	Q	K	A	G	R	L	P	C	R	K	E	W	V	A	D	C	Q	Q	R	K	R	T	L	L	R	K	T	H	F	D	N	V	P	V	K	P	Q	R	V	Y	E	E	X	N	K	A	F	G	R	D	V	C	Y	V	T	T	I	G	L	S	Q	I
Template Known Secondary structure																						T	T		S															T	T	S									S	S	B													S		T	T							S	S
Template Predicted Secondary structure
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	A	L	Y	Y	P	F	D	K	P	R	R	W	I	N	S	G	G	L	G	T	M	G	F	G	L	P	A	A	L	G	V	K	M	A	L	P	E	E	T	V	V	C	V	T	G	D	G	S	I	Q	M	N	I	Q	E	L	S	T	A	L	Q	Y	E	L	P	V	L	V	V	N	L	N	N	R	Y	L	G	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	A	Q	X	L	H	V	F	K	D	R	H	W	I	N	C	G	Q	A	G	P	L	G	W	T	I	P	A	A	L	G	V	C	A	A	D	P	K	R	N	V	V	A	I	S	G	D	F	D	F	Q	F	L	I	E	E	L	A	V	G	A	Q	F	N	I	P	Y	I	H	V	L	V	N	N	A	Y	L	G	L
Template Known Secondary structure											S	T	T	S					T	T	T			T	T														T	T															T	G	G	G							T	T											S	B
Template Predicted Secondary structure
Template SS confidence
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.
		481	.	.	.	.	.	.	.	.										490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.		.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550
Predicted Secondary structure											.	.	.	.	.	.	.	.	.																																														.
Query SS confidence											.	.	.	.	.	.	.	.	.																																														.
Query Sequence		V	K	Q	W	Q	D	M	I	Y	.	.	.	.	.	.	.	.	.	S	G	R	H	S	Q	S	Y	M	Q	S	L	P	D	F	V	R	L	A	E	A	Y	G	H	V	G	I	Q	I	S	H	P	H	E	L	E	S	K	L	S	E	A	L	E	Q	.	V	R	N	N	R	L	V	F	V	D	V	T	V	D	G	S
Query Conservation											.	.	.	.	.	.	.	.	.																																														.
Alig confidence											.	.	.	.	.	.	.	.	.																																														.
Template Conservation
Template Sequence		I	R	Q	S	Q	R	A	F	D	X	D	Y	C	V	Q	L	A	F	E	N	I	N	S	S	E	V	N	G	Y	G	V	D	H	V	K	V	A	E	G	L	G	C	K	A	I	R	V	F	K	P	E	D	I	A	P	A	F	E	Q	A	K	A	L	X	A	Q	Y	R	V	P	V	V	V	E	V	I	L	E	R	V
Template Known Secondary structure						G	G	G	G	T				S		B						T	T		S	T	T	T	T												T	T								S	G	G	G																	S								B		S
Template Predicted Secondary structure
Template SS confidence
		479	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.
		551	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	H	V	Y	P	M	Q	I	R	G	G	G	M	D	E	M	W
Query Conservation
Alig confidence					.	.	.	.
Template Conservation					.	.	.	.
Template Sequence		T	N	I	.	.	.	.	S	X	G	S	E	L	D	N	V	X
Template Known Secondary structure					.	.	.	.		B		S	S	G	G	G		B
Template Predicted Secondary structure					.	.	.	.
Template SS confidence
		559	560	.					.	.	.	.	.	.	.	.	570	.