Job Description P00893 Confidence 100.00% Date Thu Jan 5 10:57:03 GMT 2012 Rank 3 Aligned Residues 546 % Identity 23% Template c2djiA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:pyruvate oxidase; PDBTitle: crystal structure of pyruvate oxidase from aerococcus2 viridans containing fad Resolution 1.60 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		M	L	S	G	A	E	M	V	V	R	S	L	I	D	Q	G	V	K	Q	V	F	G	Y	P	G	G	A	V	L	D	I	Y	D	A	L	H	T	V	G	.	G	I	D	H	V	L	V	R	H	E	Q	A	A	V	H	M	A	D	G	L	A	R	A	T	G	E	V	G	V	V	L	V	T	S	G	P	G	A	T	N
Query Conservation																																									.
Alig confidence																																									.
Template Conservation
Template Sequence		K	I	N	I	G	L	A	V	M	K	I	L	E	S	W	G	A	D	T	I	Y	G	I	P	S	G	T	L	S	S	L	M	D	A	M	G	E	E	E	N	N	V	K	F	L	Q	V	K	H	E	E	V	G	A	M	A	A	V	M	Q	S	K	F	G	G	N	L	G	V	T	V	G	S	G	G	P	G	A	S	H
Template Known Secondary structure																T	T										T	T	T					T	T	S	S	S	T	T									S	S														T	T										T	T					T
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	T	G	I	A	T	A	Y	M	D	S	I	P	L	V	V	L	S	G	Q	V	A	T	S	L	I	G	Y	D	A	F	Q	E	C	D	M	V	G	I	S	R	P	V	V	K	H	S	F	L	V	K	Q	T	E	D	I	P	Q	V	L	K	K	A	F	W	L	A	A	S	G	R	P	G	P	V	V	V	D	L
Query Conservation
Alig confidence																																																																										.
Template Conservation																																																																										.
Template Sequence		L	I	N	G	L	Y	D	A	A	M	D	N	I	P	V	V	A	I	L	G	S	R	P	Q	R	E	L	N	M	D	A	F	Q	E	L	N	Q	N	P	M	Y	D	H	I	A	V	Y	N	R	R	V	A	Y	A	E	Q	L	P	K	L	V	D	E	A	A	R	M	A	I	A	K	R	.	G	V	A	V	L	E	V
Template Known Secondary structure		T											T										S		G	G	G	T	T	T	T		T	T										T	T		S							S	G	G	G															T	T	.	S
Template Predicted Secondary structure																																																																										.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.	.	160	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	K	D	I	L	N	P	A	N	K	L	P	Y	V	W	P	E	S	V	S	M	R	S	Y	N	P	T	T	T	G	H	K	G	Q	I	K	R	A	L	Q	T	L	V	A	A	K	K	P	V	V	Y	V	G	G	G	A	I	T	A	G	C	H	Q	Q	L	K	E	T	V	E	A	L	N	L	P	V	V	C	S	L
Query Conservation
Alig confidence																									.																																					.	.
Template Conservation																									.																																					.	.
Template Sequence		P	G	D	F	A	K	V	E	I	D	N	D	Q	W	Y	S	S	A	N	S	L	R	K	.	Y	A	P	I	A	P	A	A	Q	D	I	D	A	A	V	E	L	L	N	N	S	K	R	P	V	I	Y	A	G	I	G	T	M	G	H	G	.	.	P	A	V	Q	E	L	A	R	K	I	K	A	P	V	I	T	T	G
Template Known Secondary structure			T	T	G	G	G					G	G	G					G	G	G				.																				T		S	S							G	G	G	T	T			.	.											T							T
Template Predicted Secondary structure																									.																																					.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.			.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	G	L	G	A	F	P	A	T	H	R	Q	A	L	G	M	L	G	M	H	G	T	Y	E	A	N	M	T	M	H	N	A	D	V	I	F	A	V	G	V	R	F	D	D	R	T	T	N	N	L	A	K	Y	C	P	N	A	T	V	L	H	I	D	I	D	P	T	S	I	S	K	T	V	T	A	D	I	P	I	V
Query Conservation
Alig confidence																																																				.	.
Template Conservation																																																				.	.
Template Sequence		K	N	F	E	T	F	E	W	D	F	E	A	L	T	G	S	T	Y	R	V	G	W	K	P	A	N	E	T	I	L	E	A	D	T	V	L	F	A	G	S	N	F	P	F	S	E	V	E	G	T	.	.	F	R	N	V	D	N	F	I	Q	I	D	I	D	P	A	M	L	G	K	R	H	H	A	D	V	A	I	L
Template Known Secondary structure		T		G	G	G	S		T	T		T	T	B				S	S	S	S	S												S						S				T	T	T	T	T	T	T	T	.	.	T	T	T		S							S		G	G	G	T	T	S	S	S			S
Template Predicted Secondary structure																																																				.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290			.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	A	R	Q	V	L	E	Q	M	L	E	L	L	S	Q	E	S	A	H	Q	P	L	D	E	I	R	D	W	W	Q	Q	I	E	Q	W	R	A	R	Q	C	L	K	Y	D	T	H	S	E	K	I	K	P	Q	A	V	I	E	T	L	W	R	L	T	K	G	D	A	Y	V	T	S	D	V	G	Q	H	Q	M	F
Query Conservation
Alig confidence																						.	.	.
Template Conservation																						.	.	.
Template Sequence		G	D	A	A	L	A	I	D	E	I	L	N	K	V	D	A	V	E	E	S	.	.	.	A	W	W	T	A	N	L	K	N	I	A	N	W	R	E	Y	I	N	M	L	E	T	K	E	E	G	D	L	Q	F	Y	Q	V	Y	N	A	I	N	N	H	A	D	E	D	A	I	Y	S	I	D	V	G	N	S	T	Q	T
Template Known Secondary structure		S													S							.	.	.																						T			S	S	B														S		T	T							S	S					G
Template Predicted Secondary structure																						.	.	.
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.				.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	L	Y	Y	P	F	D	K	P	R	R	W	I	N	S	G	G	L	G	T	M	G	F	G	L	P	A	A	L	G	V	K	M	A	L	P	E	E	T	V	V	C	V	T	G	D	G	S	I	Q	M	N	I	Q	E	L	S	T	A	L	Q	Y	E	L	P	V	L	V	V	N	L	N	N	R	Y	L	G	M	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	I	R	H	L	H	M	T	P	K	N	M	W	R	T	S	P	L	F	A	T	M	G	I	A	I	P	G	G	L	G	A	K	N	T	Y	P	D	R	Q	V	W	N	I	I	G	D	G	A	F	S	M	T	Y	P	D	V	V	T	N	V	R	Y	N	M	P	V	I	N	V	V	F	S	N	T	E	Y	A	F	I
Template Known Secondary structure		G	G	G	T					T	T	S							S	S			T	T														T	T	S															G	G	G							T	T											S	B		T
Template Predicted Secondary structure
Template SS confidence
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.
		482	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Q	W	Q	D	M	I	Y	S	G	R	H	S	Q	S	Y	M	Q	S	L	P	D	F	V	R	L	A	E	A	Y	G	H	V	G	I	Q	I	S	H	P	H	E	L	E	S	K	L	S	E	A	L	E	Q	V	R	N	N	R	L	V	F	V	D	V	T	V	D	G	S	E	H	V	Y	P	M	Q	I	R
Query Conservation
Alig confidence														.	.
Template Conservation														.	.
Template Sequence		K	N	K	Y	E	D	T	N	K	N	L	F	.	.	G	V	D	F	T	D	V	D	Y	A	K	I	A	E	A	Q	G	A	K	G	F	T	V	S	R	I	E	D	M	D	R	V	M	A	E	A	V	A	A	N	K	A	G	H	T	V	V	I	D	C	K	I	T	Q	D	R	P	I	P	V	E	T	L	K
Template Known Secondary structure										S				.	.	S		B													T	T	S							B																	T	T											S						T	T	S		T
Template Predicted Secondary structure														.	.
Template SS confidence
		476	.	.	.	480	.	.	.	.	.	.	.			.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.