 |
Job Description | P00893 | Confidence | 28.62% | Date | Thu Jan 5 10:57:03 GMT 2012 |
Rank | 219 | Aligned Residues | 128 |
% Identity | 9% | Template | c2cwdA_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:low molecular weight phosphotyrosine protein phosphatase; |
PDBTitle: crystal structure of tt1001 protein from thermus thermophilus hb8
|
Resolution | 1.90 Å |
|
 |
  |   |
208 | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | |
. | . | . | 230 | . | . | . | . | . | |
|
. | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |
|
| . | . |
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | P | V | V | Y | V | G | G | G | A | I | T | A | G | C | H | Q | Q | L | . |
K | E | T | V | E | A | L | N | L | . |
. |
P | V | V | C | S | L | M | G | L | G | A | F | P | A | T | H | R | Q | A | L | G | M | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | M | H | G | T | Y | E | A | N | M | T | M | H | N | A | D |
Query Conservation |   |
|
|
|
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |
| . |   |   |
|
|
|   |
|   |   | . | . |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   | . | . | . | . | . | . | . | . | . | . |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|   |   |
|   |   |
|
|   |
|
|
|
|
|   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|
|   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|
Template Sequence |   |
R | V | L | F | V | C | L | G | N | I | C | R | S | P | M | A | E | G | I | F | R | K | L | L | K | E | R | G | L | E | D | R | F | E | V | D | S | A | G | T | G | A | W | H | V | G | E | P | M | D | P | R | A | R | R | V | L | E | E | E | G | A | Y | F | P | H | V | A | R | R | L | T | R | E | D | V | L | A | Y | D |
Template Known Secondary structure |   |
 |  |  |  |  |  | S | S | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| T | T | T |  |  |  |  |  |  |  | S | S |
| T | T | T | T |
|
|
|
|  |  |  |  |  |  |  |  |  |  | T |
|
|
|
|
|
|
|
| B |
|
|  |  |  |  |  |  |
| S |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . |
  |
  |   |
275 | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | I | F | A | V | G | V | R | F | D | D | R | T | T | N | N | L | A | K | Y | C | P | N | A | T | V | L | H | I | D | I | D | P | T | S | I | S | K | T | V | T | A | D | I | P | I | V | G | D | A | R | Q | V | L | E | Q | M | L | E | L | L |
Query Conservation |   |
  |
|
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|   |   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|
|   |
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|
Template Sequence |   |
H | I | L | V | M | D | R | E | N | L | E | E | V | L | R | R | F | P | E | A | R | G | K | V | R | L | V | L | E | E | L | G | G | G | E | V | Q | D | P | Y | Y | G | D | L | E | D | F | R | E | V | Y | W | T | L | E | A | A | L | Q | A | F |
Template Known Secondary structure |   |
 |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |
| G | G | G | T | T | T |  |  |  | G | G | G | G | G | T |
|
|
|
|
|
|
| T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
86 | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|