Job Description P00893 Confidence 100.00% Date Thu Jan 5 10:57:03 GMT 2012 Rank 13 Aligned Residues 543 % Identity 19% Template c1zpdA_ PDB info PDB header:alcohol fermentation Chain: A: PDB Molecule:pyruvate decarboxylase; PDBTitle: pyruvate decarboxylase from zymomonas mobilis Resolution 1.86 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	S	G	A	E	M	V	V	R	S	L	I	D	Q	G	V	K	Q	V	F	G	Y	P	G	G	A	V	L	D	I	Y	D	A	L	H	T	V	G	G	I	D	H	V	L	V	R	H	E	Q	A	A	V	H	M	A	D	G	L	A	R	A	T	G	E	V	G	V	V	L	V	T	S	G	P	G	A	T	N	A
Query Conservation
Alig confidence																																																																							.
Template Conservation																																																																							.
Template Sequence		S	Y	T	V	G	T	Y	L	A	E	R	L	V	Q	I	G	L	K	H	H	F	A	V	A	G	D	Y	N	L	V	L	L	D	N	L	L	L	N	K	N	M	E	Q	V	Y	C	C	N	E	L	N	C	G	F	S	A	E	G	Y	A	R	A	K	G	A	A	A	A	V	.	V	T	Y	S	V	G	A	L	S	A
Template Known Secondary structure				B												T	T		S								T	T	T									T		T	T	S						S	S																S						.			T	T	T	T
Template Predicted Secondary structure																																																																							.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.									.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.
Query Sequence		I	T	G	I	A	T	A	Y	M	D	S	I	P	L	V	V	L	S	G	Q	V	A	T	S	L	I	G	Y	D	A	F	.	.	.	.	.	.	.	.	Q	E	C	D	M	V	G	I	S	R	P	V	V	K	H	S	F	L	V	K	Q	T	E	D	I	P	Q	V	L	K	K	A	F	W	L	A	A	S	G	R	P
Query Conservation																																	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.																																									.
Template Conservation																																																																																	.
Template Sequence		F	D	A	I	G	G	A	Y	A	E	N	L	P	V	I	L	I	S	G	A	P	N	N	N	D	H	A	A	G	H	V	L	H	H	A	L	G	K	T	D	Y	H	Y	Q	L	E	M	A	K	N	I	T	A	A	A	E	A	I	Y	T	P	E	E	A	P	A	K	I	D	H	V	I	K	T	A	L	R	E	K	.
Template Known Secondary structure											T	T												G	G	G	T	T	T	T				T	T	S		S	S	S										G	G	G		S							S	G	G	G																T	.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	P	V	V	V	D	L	P	K	D	I	L	N	P	A	N	K	L	P	Y	V	W	P	E	S	V	S	M	R	S	Y	N	P	T	T	T	G	H	K	G	Q	I	K	R	A	L	Q	T	L	V	A	A	K	K	P	V	V	Y	V	G	G	G	A	I	T	A	G	C	H	Q	Q	L	K	E	T	V	E	A	L	N
Query Conservation
Alig confidence																																				.	.
Template Conservation																																				.	.
Template Sequence		K	P	V	Y	L	E	I	A	C	N	I	A	S	M	P	C	A	A	P	G	P	A	S	A	L	F	N	D	E	A	S	D	E	A	.	.	S	L	N	A	A	V	D	E	T	L	K	F	I	A	N	R	D	K	V	A	V	L	V	G	S	K	L	R	A	A	G	A	E	E	A	A	V	K	F	T	D	A	L	G
Template Known Secondary structure										T	T	S	T	T	S	B							G	G	G	G	G									.	.														T	T		S								T	T	T	T	T	T	T
Template Predicted Secondary structure																																				.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.			.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.		.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		L	P	V	V	C	S	L	M	G	L	G	A	F	P	A	T	H	R	Q	A	L	G	M	L	.	G	M	H	G	T	Y	E	A	N	M	T	M	H	N	A	D	V	I	F	A	V	G	V	R	F	D	D	R	T	T	N	N	L	A	K	Y	C	P	N	A	T	V	L	H	I	D	I	D	P	T	S	I	S	K	T
Query Conservation																										.
Alig confidence																										.
Template Conservation
Template Sequence		G	A	V	A	T	M	A	A	A	K	S	F	F	P	E	E	N	A	L	Y	I	G	T	S	W	G	E	V	S	Y	P	G	V	E	K	T	M	K	E	A	D	A	V	I	A	L	A	P	V	F	N	D	Y	S	T	T	G	W	T	D	I	P	D	P	K	K	L	V	L	A	E	P	R	S	V	V	V	N	G	I
Template Known Secondary structure								G	G	G	T	T	S	S		T	T	S	T	T							G	G	G	S		T	T									S						S					T	T	T	T	T	T	T	T					G	G	G						S	S					T	T
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	A	D	I	P	I	V	G	D	A	R	Q	V	L	E	Q	M	L	E	L	L	S	Q	E	S	A	H	Q	P	L	D	E	I	R	D	W	W	Q	Q	I	E	Q	W	R	A	R	Q	C	L	K	Y	D	T	H	S	E	K	I	K	P	Q	A	V	I	E	T	L	W	R	L	T	K	G	D	A	Y	V	T	S
Query Conservation
Alig confidence							.	.	.	.																	.	.	.	.	.	.	.
Template Conservation							.	.	.	.																	.	.	.	.	.	.	.
Template Sequence		R	F	P	S	V	.	.	.	.	H	L	K	D	Y	L	T	R	L	A	Q	K	V	S	K	K	.	.	.	.	.	.	.	T	G	S	L	D	F	F	K	S	L	N	A	G	E	L	K	K	A	A	P	A	D	P	S	A	P	L	V	N	A	E	I	A	R	Q	V	E	A	L	L	T	P	N	T	T	V	I	A
Template Known Secondary structure					S		.	.	.	.																	.	.	.	.	.	.	.										T				S									T	T	S	B													T			T	T
Template Predicted Secondary structure							.	.	.	.																	.	.	.	.	.	.	.
Template SS confidence
		318	.	320	.	.					.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.								.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	G	Q	H	Q	M	F	A	A	L	Y	Y	P	F	D	K	P	R	R	W	I	N	S	G	G	L	G	T	M	G	F	G	L	P	A	A	L	G	V	K	M	A	L	P	E	E	T	V	V	C	V	T	G	D	G	S	I	Q	M	N	I	Q	E	L	S	T	A	L	Q	Y	E	L	P	V	L	V	V	N	L
Query Conservation
Alig confidence								.
Template Conservation								.
Template Sequence		E	T	G	D	S	W	.	F	N	A	Q	R	M	K	L	P	N	G	A	R	V	E	Y	E	M	Q	W	G	H	I	G	W	S	V	P	A	A	F	G	Y	A	V	G	A	P	E	R	R	N	I	L	M	V	G	D	G	S	F	Q	L	T	A	Q	E	V	A	Q	M	V	R	L	K	L	P	V	I	I	F	L	I
Template Known Secondary structure			S	S				.					T					T	T							T	T	T			T	T	T													T	T	S															G	G	G							T	T
Template Predicted Secondary structure								.
Template SS confidence
		387	.	.	390	.	.		.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.
		474	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.										.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.
Query Sequence		N	N	R	Y	L	G	M	V	K	Q	W	Q	D	M	I	Y	S	G	R	H	S	Q	S	Y	M	Q	S	L	P	D	F	V	R	L	A	E	A	Y	G	.	.	.	.	.	.	.	.	.	H	V	G	I	Q	I	S	H	P	H	E	L	E	S	K	L	S	E	A	L	E	Q	V	R	N	N	R	L	V	F	V	D
Query Conservation																																									.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.																							.	.
Template Conservation																		.	.	.	.	.	.	.																																																.	.
Template Sequence		N	N	Y	G	Y	T	I	E	V	M	I	H	D	G	P	Y	.	.	.	.	.	.	.	N	N	I	K	N	W	D	Y	A	G	L	M	E	V	F	N	G	N	G	G	Y	D	S	G	A	A	K	G	L	K	A	K	T	G	G	E	L	A	E	A	I	K	V	A	L	A	N	.	.	T	D	G	P	T	L	I	E
Template Known Secondary structure				S	S						T	T	S			G	G	.	.	.	.	.	.	.	G																	T	T	S	S	S										S	B															.	.		S	S
Template Predicted Secondary structure																		.	.	.	.	.	.	.																																																.	.
Template SS confidence
		466	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.								.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.			.	530	.	.	.	.	.	.
		545	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	V	D	G	S	E	H	V	Y	P	M	Q	I	R	G	G	G	M	D	E	M	W	L	S	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	F	I	G	R	E	D	C	T	E	E	L	V	K	W	G	K	R	V	A	A	A	N	S	R	K
Template Known Secondary structure						T	T
Template Predicted Secondary structure
Template SS confidence
		537	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.