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Job DescriptionP00893
Confidence100.00%DateThu Jan 5 10:57:03 GMT 2012
Rank2Aligned Residues550
% Identity26%Templatec1powA_
PDB info PDB header:oxidoreductase(oxygen as acceptor)Chain: A: PDB Molecule:pyruvate oxidase; PDBTitle: the refined structures of a stabilized mutant and of wild-type2 pyruvate oxidase from lactobacillus plantarum
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30......... 40.........50.........60.........70.........80
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Query Sequence  EMLSGAEMVVRSLIDQGVKQVFGYPGGAVLDIYDALHT. VGGIDHVLVRHEQAAVHMADGLARATGEVGVVLVTSGPGAT
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Template Sequence  TNILAGAAVIKVLEAWGVDHLYGIPGGSINSIMDALSAERDRIHYIQVRHEEVGAMAAAADAKLTGKIGVCFGSAGPGGT
Template Known Secondary structure 
TT




GGGTTTTS
SSSS

TT
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   910.........20.........30.........40.........50.........60.........70.........80........
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  NAITGIATAYMDSIPLVVLSGQVATSLIGYDAFQECDMVGISRPVVKHSFLVKQTEDIPQVLKKAFWLAASGRPGPVVVD
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Template Sequence  HLMNGLYDAREDHVPVLALIGQFGTTGMNMDTFQEMNENPIYADVADYNVTAVNAATLPHVIDEAIRRAYAHQ. GVAVVQ
Template Known Secondary structure  TTTT



TTTTTS

TT



TTT


SSST.S
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   8990.........100.........110.........120.........130.........140.........150.........160. ......
 
   161........170.........180.........190.........200.........210.........220.........230.........240
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Query Sequence  LPKDILNPANKLPYVWPESVSMRSYNPTTTGHKGQIKRALQTLVAAKKPVVYVGGGAITAGCHQQLKETVEALNLPVVCS
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Template Sequence  IPVDLPWQQIPAEDWYASANSYQT. PLLPEPDVQAVTRLTQTLLAAERPLIYYGIGARKAG. . KELEQLSKTLKIPLMST
Template Known Secondary structure  TTGGGSGGG



GGG


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SS
GGGGGG..T


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   168.170.........180.........190. ........200.........210.........220....... ..230.........240....
 
   241........250.........260.........270.........280.........290.........300.........310.........320
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Query Sequence  LMGLGAFPATHRQALGMLGMHGTYEANMTMHNADVIFAVGVRFDDRTTNNLAKYCPNATVLHIDIDPTSISKTVTADIPI
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Template Sequence  YPAKGIVADRYPAYLGSANRVAQKPANEALAQADVVLFVGNNYPFAEVSKA. . FKNTRYFLQIDIDPAKLGKRHKTDIAV
Template Known Secondary structure  GGGTTSS
TT
TTB



SSS


SS


TTTT..TTT
S
S
GGGTTSSS

S
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   245....250.........260.........270.........280.........290..... ....300.........310.........320..
 
   321........330.........340.........350.........360.........370.........380.........390.........400
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Query Sequence  VGDARQVLEQMLELLSQESAHQPLDEIRDWWQQIEQWRARQCLKYDTHSEKIKPQAVIETLWRLTKGDAYVTSDVGQHQM
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Template Sequence  LADAQKTLAAILAQVSEREST. . . PWWQANLANVKNWRAYLASLEDKQEGPLQAYQVLRAVNKIAEPDAIYSIDVGDINL
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T






...T

SSB



TT

SS
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   323......330.........340... ......350.........360.........370.........380.........390.........
 
   401........410.........420.........430.........440.........450.........460.........470.........480
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Query Sequence  FAALYYPFDKPRRWINSGGLGTMGFGLPAALGVKMALPEETVVCVTGDGSIQMNIQELSTALQYELPVLVVNLNNRYLGM
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Template Sequence  NANRHLKLTPSNRHITSNLFATMGVGIPGAIAAKLNYPERQVFNLAGDGGASMTMQDLATQVQYHLPVINVVFTNCQYGF
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TT



SS

TTT
TTS
GGGTT


SB
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   400.........410.........420.........430.........440.........450.........460.........470.........
 
   481........490.........500.........510.........520.........530.........540.........550.........560
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Query Sequence  VKQWQDMIYSGRHSQSYMQSLPDFVRLAEAYGHVGIQISHPHELESKLSEALEQVRNNRLVFVDVTVDGSEHVYPMQIRG
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Template Sequence  IKDEQEDTNQNDFIG. VEFNDIDFSKIADGVHMQAFRVNKIEQLPDVFEQAKAI. AQHEPVLIDAVITGDRPLPAEKLRL
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S.SB




TT

BGGG.TTTS








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   480.........490.... .....500.........510.........520.........530.. .......540.........550.......
 
   561.
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Query Sequence  GG
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Template Sequence  DS
Template Known Secondary structure 
T
Template Predicted Secondary structure 

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   558.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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