Return to main results Retrieve Phyre Job Id

Job DescriptionP00893
Confidence100.00%DateThu Jan 5 10:57:03 GMT 2012
Rank9Aligned Residues529
% Identity28%Templatec1ozhD_
PDB info PDB header:lyaseChain: D: PDB Molecule:acetolactate synthase, catabolic; PDBTitle: the crystal structure of klebsiella pneumoniae acetolactate2 synthase with enzyme-bound cofactor and with an unusual3 intermediate.
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
Predicted Secondary structure 




















Query SS confidence 















































































Query Sequence  LSGAEMVVRSLIDQGVKQVFGYPGGAVLDIYDALHTVGGIDHVLVRHEQAAVHMADGLARATGEVGVVLVTSGPGATNAI
Query Conservation   


  
   
   

  


 

     
   
     
  
    
  
   
 


   
   
   
 


  
  
Alig confidence 




































.









































Template Conservation    

  
   
   

  


 

     
  

   . 
  
    
  
   
 
 
  

   
   
 


  
 
Template Sequence  AHGADLVVSQLEAQGVRQVFGIPGAKIDKVFDSLLDS. SIRIIPVRHEANAAFMAAAVGRITGKAGVALVTSGPGCSNLI
Template Known Secondary structure  S
TT




GGGTS.SS
SSSS

STTT
Template Predicted Secondary structure 











.








Template SS confidence 















































































   11........20.........30.........40....... ..50.........60.........70.........80.........
 
   84.....90.........100.........110.........120.........130.........140.........150.........160...
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  TGIATAYMDSIPLVVLSGQVATSLIGYDAFQECDMVGISRPVVKHSFLVKQTEDIPQVLKKAFWLAASGRPGPVVVDLPK
Query Conservation    
  
     


 
 
  
    
    
  
         
    
         
  
   
     


 
 

 
Alig confidence 




















......




















































Template Conservation    
  
     


 
 
   ......   
  
   
     
    
         
  
   
     


 
 

 
Template Sequence  TGMATANSEGDPVVALGGAVK. . . . . . RADKSMDTVAMFSPVTKYAIEVTAPDALAEVVSNAFRAAEQGRPGSAFVSLPQ
Template Known Secondary structure  T



......GGG



GGG
S


GGGSSS

Template Predicted Secondary structure 







......

















Template SS confidence 















































































   90.........100.........110 .........120.........130.........140.........150.........160...
 
   164.....170.........180.........190.........200.........210.........220.........230.........240...
Predicted Secondary structure 










































Query SS confidence 















































































Query Sequence  DILNPANKLPYVWPESVSMRSYNPTTTGHKGQIKRALQTLVAAKKPVVYVGGGAITAGCHQQLKETVEALNLPVVCSLMG
Query Conservation 

                              
      
  
 




 
 
         
  


 
  

      
Alig confidence 




















.....





















































Template Conservation 
                    .....      
      
  
 




 
 
     
   
  


    

 
    
Template Sequence  DVVDGPVSGKVLPASGAPQMG. . . . . AAPDDAIDQVAKLIAQAKNPIFLLGLMASQPENSKALRRLLETSHIPVTSTYQA
Template Known Secondary structure  S







S



.....


T
SS
GGGGSGGG



GGG
Template Predicted Secondary structure 

















.....

















Template SS confidence 















































































   170.........180.........190 .........200.........210.........220.........230.........240....
 
   244.....250. ........260.........270.........280.........290.........300.........310.........320..
Predicted Secondary structure 







.












































Query SS confidence 







.






































































Query Sequence  LGAFPATH. RQALGMLGMHGTYEANMTMHNADVIFAVGVRFDDRTTNNLAKYCPNATVLHIDIDPTSISKTVTADIPIVG
Query Conservation          .
   
  
          
  

 

 

  
                 
 
  
             
  
Alig confidence 







.









































..


























Template Conservation               
  
          
   
 

 

             ..     
 
                
  
Template Sequence  AGAVNQDNFSRFAGRVGLFNNQAGDRLLQLADLVICIGYSPVEYEPAMWNS. . GNATLVHIDVLPAYEERNYTPDVELVG
Template Known Secondary structure  TTTS
GGG
TT
SSBTT

SS

GGGS
GGGT

..S
SSS



BTTB

SS
Template Predicted Secondary structure 
































..











Template SS confidence 















































































   245....250.........260.........270.........280.........290..... ....300.........310.........320..
 
   323......330.........340.........350.........360.........370.........380.........390.........400..
Predicted Secondary structure 


























Query SS confidence 















































































Query Sequence  DARQVLEQMLELLSQESAHQPLDEIRDWWQQIEQWRARQCLKYDTHSEKIKPQAVIETLWRLTKGDAYVTSDVGQHQMFA
Query Conservation 
    
  
   
                                             
        


 
 
      
Alig confidence 




















......




















































Template Conservation 
    
  
   
        ......                               
        

  
 
      
Template Sequence  DIAGTLNKLAQNIDHRLVLSP. . . . . . QAAEILRDRQHQRELLDLNQFALHPLRIVRAMQDIVNSDVTLTVDMGSFHIWI
Template Known Secondary structure 
T

S




......



SSB


TT

SS
Template Predicted Secondary structure 








......




















Template SS confidence 















































































   323......330.........340... ......350.........360.........370.........380.........390......
 
   403......410.........420.........430.........440.........450.........460.........470.........480..
Predicted Secondary structure 


























Query SS confidence 















































































Query Sequence  ALYYPFDKPRRWINSGGLGTMGFGLPAALGVKMALPEETVVCVTGDGSIQMNIQELSTALQYELPVLVVNLNNRYLGMVK
Query Conservation                    
 

  
  


 


     

 
 




     

 

    


 


 

       
Alig confidence 















































































Template Conservation                      

  
  


   
     

 
 




     

 

      
 


 

       
Template Sequence  ARYLYTFRARQVMISNGQQTMGVALPWAIGAWLVNPERKVVSVSGDGGFLQSSMELETAVRLKANVLHLIWVDNGYNMVA
Template Known Secondary structure  TGGG


S


TT

TT
STTS
TTT


SB
Template Predicted Secondary structure 



































Template SS confidence 















































































   402.......410.........420.........430.........440.........450.........460.........470.........480.
 
   483......490.........500.........510.........520.........530.........540.........550.......
Predicted Secondary structure 







































Query SS confidence 










































































Query Sequence  QWQDMIYSGRHSQSYMQSLPDFVRLAEAYGHVGIQISHPHELESKLSEALEQVRNNRLVFVDVTVDGSEHVYPMQ
Query Conservation                      
   

 
 
     
    

  

  
        
 



 
       
  
Alig confidence 







..








































...




















Template Conservation          ..          
    
 
 
     
    

  

  
  ...  

 



 

    
    
Template Sequence  IQEEKKYQ. . RLSGVEFGPMDFKAYAESFGAKGFAVESAEALEPTLRAAMD. . . VDGPAVVAIPVDYRDNPLLMG
Template Known Secondary structure  S..S

S
B




TTTS

STTT...
SS
B

TTT
Template Predicted Secondary structure 







..
















...







Template SS confidence 










































































   482....... 490.........500.........510.........520.........530 .........540.........550.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions