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Job DescriptionP00893
Confidence100.00%DateThu Jan 5 10:57:03 GMT 2012
Rank19Aligned Residues507
% Identity22%Templatec1ovmC_
PDB info PDB header:lyaseChain: C: PDB Molecule:indole-3-pyruvate decarboxylase; PDBTitle: crystal structure of indolepyruvate decarboxylase from2 enterobacter cloacae
Resolution2.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60.........70.........80....
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Query Sequence  SGAEMVVRSLIDQGVKQVFGYPGGAVLDIYDALHTVGGIDHVLVRHEQAAVHMADGLARATGEVGVVLVTSGPGATNAIT
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Template Sequence  CVADYLLDRLTDCGADHLFGVPGDYNLQFLDHVIDSPDICWVGCANELNASYAADGYARCKGFA. ALLTTFGVGELSAMN
Template Known Secondary structure  BTT




GGG
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   6...10.........20.........30.........40.........50.........60......... 70.........80....
 
   85....90.........100.........110..... ....120.........130.........140.........150......
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Query Sequence  GIATAYMDSIPLVVLSGQVATSLIGYDAFQE. . . . . . . . CDMVGISRPVVKHSFLVKQTEDIPQVLKKAFWLAASGRPGP
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Template Sequence  GIAGSYAEHVPVLHIVGAPGTAAQQRGELLHHTLGDGEFRHFYHMSEPITVAQAVLTEQNACYEIDRVLTTMLRER. . RP
Template Known Secondary structure  TT



T


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   85....90.........100.........110.........120.........130.........140.........150.........160 ..
 
   157..160.........170.........180.........190.........200.........210.........220.........230......
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Query Sequence  VVVDLPKDILNPANKLPYVWPESVSMRSYNPTTTGHKGQIKRALQTLVAAKKPVVYVGGGAITAGCHQQLKETVEALNLP
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Template Sequence  GYLMLPADVAKKAATPP. . . VNALTHKQAHADSACLKAFRDAAENKLAMSKRTALLADFLVLRHGLKHALQKWVKEVPMA
Template Known Secondary structure  SB



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   163......170......... 180.........190.........200.........210.........220.........230.........
 
   237..240.........250........ .260.........270.........280.........290.........300.........310.....
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Query Sequence  VVCSLMGLGAFPATHRQALGML. GMHGTYEANMTMHNADVIFAVGVRFDDRTTNNLAKYCPNATVLHIDIDPTSISKTVT
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Template Sequence  HATMLMGKGIFDERQAGFYGTYSGSASTGAVKEAIEGADTVLCVGTRFTDTLTAGFTHQLTPAQTIEVQPHAARVGDVWF
Template Known Secondary structure 
TTTTTSS
TTSTT





GGGS
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TTTTTTT




TTT
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   240.........250.........260.........270.........280.........290.........300.........310.........
 
   316...320.........330.........340.........350.........360.........370.........380.........390.....
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Query Sequence  ADIPIVGDARQVLEQMLELLSQESAHQPLDEIRDWWQQIEQWRARQCLKYDTHSEKIKPQAVIETLWRLTKGDAYVTSDV
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Template Sequence  TGIPMNQAIETLVELCKQ. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . HVHAPDGSLTQENFWRTLQTFIRPGDIILADQ
Template Known Secondary structure  S

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SB



TT

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   320.........330....... ..340.........350.........360.........
 
   396...400.........410.........420.........430.........440.........450.........460.........470.....
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Query Sequence  GQHQMFAALYYPFDKPRRWINSGGLGTMGFGLPAALGVKMALPEETVVCVTGDGSIQMNIQELSTALQYELPVLVVNLNN
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Template Sequence  GTSAFGAIDLR. LPADVNFIVQPLWGSIGYTLAAAFGAQTACPNRRVIVLTGDGAAQLTIQELGSMLRDKQHPIILVLNN
Template Known Secondary structure  TTT

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TTT

TT
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   384.....390.... .....400.........410.........420.........430.........440.........450.........460..
 
   476...480.........490.........500.........510.. .......520.........530.........540.........550.
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Query Sequence  RYLGMVKQWQDMIYSGRHSQSYMQSLPDFVRLAEAYG. . . . HVGIQISHPHELESKLSEALEQVRNNRLVFVDVTVDGSE
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Template Sequence  EGYTVERAIH. . . . . GAEQRYNDIALWNWTHIPQALSLDPQSECWRVSEAEQLADVLEKVAH. . . HERLSLIEVMLPKAD
Template Known Secondary structure  SS
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TT
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GGGSTTTS
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BTT...
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   463......470.. .......480.........490.........500.........510......... 520.........530....
 
   552.....
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Query Sequence  HVYPMQ
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Template Conservation  . 
   
Template Sequence  . IPPLL
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   535....
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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