Job Description P00893 Confidence 98.11% Date Thu Jan 5 10:57:03 GMT 2012 Rank 88 Aligned Residues 242 % Identity 11% Template c1olsB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:2-oxoisovalerate dehydrogenase beta subunit; PDBTitle: roles of his291-alpha and his146-beta' in the reductive2 acylation reaction catalyzed by human branched-chain3 alpha-ketoacid dehydrogenase Resolution 1.85 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.				.	.	.	20	.	.	.	.	.	.	.	.	.	30	.					.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																	.	.	.																.	.	.	.																		.
Query SS confidence																	.	.	.																.	.	.	.																		.
Query Sequence		E	M	L	S	G	A	E	M	V	V	R	S	L	I	D	.	.	.	Q	G	V	K	Q	V	F	G	Y	P	G	G	A	V	L	.	.	.	.	D	I	Y	D	A	L	H	T	V	G	G	I	D	H	V	L	V	.	R	H	E	Q	A	A	V	H	M	A	D	G	L	A	R	A	T	G	E	V	G	V	V	L	V
Query Conservation																	.	.	.																.	.	.	.																		.
Alig confidence																	.	.	.																.	.	.	.																		.																					.
Template Conservation																																																																													.
Template Sequence		Q	K	M	N	L	F	Q	S	V	T	S	A	L	D	N	S	L	A	K	D	P	T	A	V	I	F	G	E	D	V	A	F	G	G	V	F	R	C	T	V	G	L	R	D	K	Y	G	K	D	R	V	F	N	T	P	L	C	E	Q	G	I	V	G	F	G	I	G	I	A	V	T	G	A	T	A	.	I	A	E	I
Template Known Secondary structure																						T	T						T	T	T	T	T	T		T	T	S	T	T	T	T							T	T	T						S															T	T				.
Template Predicted Secondary structure																																																																													.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.										.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.																																			.
Query SS confidence																				.	.	.	.	.	.	.	.	.																																			.
Query Sequence		T	S	G	P	G	A	T	N	A	I	T	G	I	A	T	A	Y	M	.	.	.	.	.	.	.	.	.	D	S	I	P	L	V	V	L	S	G	Q	V	A	T	S	L	I	G	Y	D	A	F	Q	E	C	D	M	V	G	I	S	R	P	V	.	V	K	H	S	F	L	V	K	Q	T	E	D	I	P	Q	V	L	K
Query Conservation																				.	.	.	.	.	.	.	.	.																																			.
Alig confidence																				.	.	.	.	.	.	.	.	.																			.																.
Template Conservation																																															.
Template Sequence		Q	F	A	D	Y	I	F	P	A	F	D	Q	I	V	N	E	A	A	K	Y	R	Y	R	S	G	D	L	F	N	C	G	S	L	T	I	R	S	P	W	G	C	V	G	H	G	.	A	L	Y	H	S	Q	S	P	E	A	F	F	A	H	C	P	G	I	K	V	V	I	P	R	S	P	F	Q	A	K	G	L	L	L
Template Known Secondary structure		S	S	G	G	G		G	G	G						T	T	G	G	G						T	T	S	S			T	T								S			S	S		.	G	G	G	S	S									T		T	T							S	S
Template Predicted Secondary structure																																															.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	F	W	L	A	A	S	G	R	P	G	P	V	V	V	D	L	P	K	D	I	L	N	P	A	N	K	L	P	Y	V	W	P	E	S	V	S	M	R	S	Y	N	P	T	T	T	G	H	K	G	Q	I	K	R	A	L	Q	T	L	V	A	A	K	K	P	V	V	Y	V	G	G	G	A	I	T	A	G	C	H
Query Conservation
Alig confidence						.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	C	I	E	.	.	.	.	.	D	K	N	P	C	I	F	F	E	P	K	I	L	Y	R	A	A	A	E	E	V	P	I	E	P	Y	N	I	P	L	S	Q	A	E	V	I	Q	E	G	S	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	T	L	V	A	W	G	T	Q	V	H	V	I	R
Template Known Secondary structure						.	.	.	.	.	S	S	S								G	G	G	S	S	S							S	S						T	T									S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T
Template Predicted Secondary structure						.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		177	.	.	180						.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.																	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	L	K	E	T	V	E	A	L	N	L	P	V	V	C	S	L	M	G	L	G	A	F	P	A	T	H	R	Q	A	L	G	M	L	G	M	H	G	T	Y	E	A	N	M	T	M	H	N	A	D	V	I	F	A	V
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	V	A	S	M	A	K	E	K	L	G	V	S	C	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	I	D	L	R	T	I	I	P	W	D	V	D	T	I	C	K	S	V	I	K	T	G	R	L	L	I	S
Template Known Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.								S
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.														.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions