Job Description P25437 Confidence 100.00% Date Thu Jan 5 11:41:49 GMT 2012 Rank 38 Aligned Residues 346 % Identity 15% Template c3iupB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:putative nadph:quinone oxidoreductase; PDBTitle: crystal structure of putative nadph:quinone oxidoreductase2 (yp_296108.1) from ralstonia eutropha jmp134 at 1.70 a resolution Resolution 1.70 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	S	R	A	A	V	A	F	A	P	G	K	P	L	E	I	V	E	I	D	V	A	P	P	K	K	G	E	V	L	I	K	V	T	H	T	G	V	C	H	T	D	A	F	T	L	S	G	D	D	P	E	G	V	F	P	V	V	L	G	H	E	G	A	G	V	V	V	E	V	G	E	G	V	T	S	V	K	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Q	L	R	S	R	I	K	S	S	G	E	L	E	L	S	L	D	S	I	D	T	P	H	P	G	P	D	E	V	L	I	R	I	E	A	S	P	L	N	P	S	D	L	G	L	L	F	G	A	A	D	X	S	T	A	K	A	S	G	T	A	E	R	P	I	V	T	A	R	V	P	E	G	A	X	R	S	X	A
Template Known Secondary structure										T	T	S																T	T																					T	T												S	S	S									G	G	G	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	H	V	I	P	L	Y	T	A	E	C	G	E	C	E	F	C	R	S	G	K	T	N	L	C	V	A	V	R	E	T	Q	G	K	G	L	M	P	D	G	T	T	R	F	S	Y	N	G	Q	P	L	Y	H	Y	M	G	C	S	T	F	S	E	Y	T	V	V	A	E	V	S	L	A	K	I	N	P	E	A	N
Query Conservation
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	R	L	D	A	S	X	P	V	G	N	E	G	A	G	V	V	V	E	A	G	S	S	P	A	A	Q	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	X	G	K	T	V	A	A	I	G	G	A	X	Y	S	Q	Y	R	C	I	P	A	D	Q	C	L	V	L	P	E	G	A	T
Template Known Secondary structure		G	G	T	T							S											S	S					T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T								S			S	B	S						G	G	G						T	T
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.																				.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		H	E	H	V	C	L	L	G	C	G	V	T	T	G	I	G	A	V	H	N	T	A	K	V	Q	P	G	D	S	V	A	V	F	G	L	G	A	I	G	L	A	V	V	Q	G	A	R	Q	A	K	A	G	R	I	I	A	I	D	T	N	P	K	K	F	D	L	A	R	R	F	G	A	T	D	C	I	N	P	N	D
Query Conservation
Alig confidence																																																						.
Template Conservation																																																						.
Template Sequence		P	A	D	G	A	S	S	F	V	N	P	L	T	A	L	G	X	V	E	T	X	R	L	E	G	H	S	A	L	V	H	T	A	A	A	S	N	L	G	Q	X	L	N	Q	I	C	L	K	D	G	I	K	.	L	V	N	I	V	R	K	Q	E	Q	A	D	L	L	K	A	Q	G	A	V	H	V	C	N	A	A	S
Template Known Secondary structure						T	T	S	S																T	T		S					S	S	T	T	S														T			.						S	S										T	T		S					T	T	S
Template Predicted Secondary structure																																																						.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.																.	280	.	.	.	.	.	.	.	.	.	290		.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Query Sequence		Y	D	K	P	I	K	D	V	L	L	D	I	N	K	W	G	I	D	H	T	F	E	C	I	G	N	V	N	V	M	R	A	A	L	E	S	A	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	G	W	G	Q	S	V	I	I	G	V	A	.	V	A	G	Q	E	I	S	T	R	P	F	Q	L	V
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Alig confidence					.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation					.
Template Sequence		P	T	F	.	X	Q	D	L	T	E	A	L	V	S	T	G	A	T	I	A	F	D	A	T	G	G	G	K	L	G	G	Q	I	L	T	C	X	E	A	A	L	N	K	S	A	R	E	Y	S	R	Y	G	S	T	T	H	K	Q	V	Y	L	Y	G	G	L	D	T	S	P	T	E	F	N	R	N	F	G	X	A	W
Template Known Secondary structure		T	T		.																			S					S																T			S			T	T			S	S										S											S		S
Template Predicted Secondary structure					.
Template SS confidence
		225	.	.		.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.		.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.			.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure																															.																					.	.
Query SS confidence																															.																					.	.
Query Sequence		T	G	R	V	W	K	G	S	A	F	G	G	V	K	G	R	S	Q	L	P	G	M	V	E	D	A	M	K	G	.	D	I	D	L	E	P	F	V	T	H	T	M	S	L	D	E	I	N	D	A	.	.	F	D	L	M	H	E	G	K	S	I	R	T	V	I
Query Conservation																															.																					.	.
Alig confidence																															.																					.	.
Template Conservation
Template Sequence		G	X	G	G	W	L	L	F	P	F	L	Q	K	I	G	R	E	R	A	N	A	L	K	Q	R	V	V	A	E	L	K	T	T	F	A	S	H	Y	S	K	E	I	S	L	A	E	V	L	D	L	D	X	I	A	V	Y	N	K	R	A	T	G	E	K	Y	L
Template Known Secondary structure																														T	T	T	T	T	T					S									T									T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions