Job Description P25437 Confidence 100.00% Date Thu Jan 5 11:41:49 GMT 2012 Rank 8 Aligned Residues 340 % Identity 21% Template c1pl6A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:sorbitol dehydrogenase; PDBTitle: human sdh/nadh/inhibitor complex Resolution 2.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.				.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.
Query SS confidence																																																						.	.	.
Query Sequence		K	S	R	A	A	V	A	F	A	P	G	K	P	L	E	I	V	E	I	D	V	A	P	P	K	K	G	E	V	L	I	K	V	T	H	T	G	V	C	H	T	D	A	F	T	L	S	G	D	D	P	E	.	.	.	G	V	F	P	V	V	L	G	H	E	G	A	G	V	V	V	E	V	G	E	G	V	T	S	V
Query Conservation																																																						.	.	.
Alig confidence														.																																								.	.	.
Template Conservation														.
Template Sequence		N	N	L	S	L	V	V	H	G	P	G	D	.	L	R	L	E	N	Y	P	I	P	E	P	G	P	N	E	V	L	L	R	X	H	S	V	G	I	C	G	S	D	V	H	Y	W	E	Y	G	R	I	G	N	F	I	V	K	K	P	X	V	L	G	H	E	A	S	G	T	V	E	K	V	G	S	S	V	K	H	L
Template Known Secondary structure											T	T		.													T	T																						S			T	T					S																	T	T			S
Template Predicted Secondary structure														.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.		.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	G	D	H	V	I	P	L	Y	T	A	E	C	G	E	C	E	F	C	R	S	G	K	T	N	L	C	V	A	V	R	E	T	Q	G	K	G	L	M	P	D	G	T	T	R	F	S	Y	N	G	Q	P	L	Y	H	Y	M	G	C	S	T	F	S	E	Y	T	V	V	A	E	V	S	L	A	K	I	N	P	E
Query Conservation
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	P	G	D	R	V	A	I	E	P	G	A	P	R	E	N	D	E	F	C	K	X	G	R	Y	N	L	S	P	S	I	F	F	C	A	T	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	D	D	G	N	L	C	R	F	Y	K	H	N	A	A	F	C	Y	K	L	P	D	N
Template Known Secondary structure			T	T							S				S	S							T	T		G	G	G		T	T				T	T	S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S					B	S						G	G	G						T	T
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.																					.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	H	E	H	V	C	L	L	G	C	G	V	T	T	G	I	G	A	V	H	N	T	A	K	V	Q	P	G	D	S	V	A	V	F	G	L	G	A	I	G	L	A	V	V	Q	G	A	R	Q	A	K	A	G	R	I	I	A	I	D	T	N	P	K	K	F	D	L	A	R	R	F	G	A	T	D	C	I	N	P
Query Conservation
Alig confidence																								.	.
Template Conservation																								.	.
Template Sequence		V	T	F	E	E	G	A	L	I	E	P	L	S	V	G	I	H	A	C	R	R	G	.	.	G	V	T	L	G	H	K	V	L	V	C	G	A	G	P	I	G	X	V	T	L	L	V	A	K	A	X	G	A	A	Q	V	V	V	T	D	L	S	A	T	R	L	S	K	A	K	E	I	G	A	D	L	V	L	Q	I
Template Known Secondary structure		S																						.	.	T			T	T									S													T	T		S							S											T	T		S
Template Predicted Secondary structure																								.	.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.			.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	D	Y	D	K	P	I	K	D	V	L	L	D	I	N	K	W	G	I	D	H	T	F	E	C	I	G	N	V	N	V	M	R	A	A	L	E	S	A	H	R	G	W	G	Q	S	V	I	I	G	V	A	V	A	G	Q	E	I	S	T	R	P	F	Q	L	V	T	G	R	V	W	K	G	S	A	F	G	G	V	K
Query Conservation
Alig confidence																																																										.	.																			.	.	.
Template Conservation																																																										.	.																			.	.	.
Template Sequence		S	K	E	S	P	Q	E	I	A	R	K	V	E	G	Q	L	G	C	K	P	E	V	T	I	E	C	T	G	A	E	A	S	I	Q	A	G	I	Y	A	T	R	S	G	G	T	L	V	L	V	G	L	G	S	E	X	T	.	.	T	V	P	L	L	H	A	A	I	R	E	V	D	I	K	G	V	F	.	.	.	R
Template Known Secondary structure		S	S															T	S			S						S													S		T	T							S				S	S		.	.									T	T	T								.	.	.	S
Template Predicted Secondary structure																																																										.	.																			.	.	.
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.			280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.				.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	S	Q	L	P	G	M	V	E	D	A	M	K	G	D	I	D	L	E	P	F	V	T	H	T	M	S	L	D	E	I	N	D	A	F	D	L	M	H	E	G	K	S	I	R	T	V	I	R	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	C	N	T	W	P	V	A	I	S	X	L	A	S	K	S	V	N	V	K	P	L	V	T	H	R	F	P	L	E	K	A	L	E	A	F	E	T	F	K	K	G	L	G	L	K	I	X	L	K	C
Template Known Secondary structure			S	S											T	T	S				G	G	G							G	G	G										T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions