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Job DescriptionP25437
Confidence100.00%DateThu Jan 5 11:41:49 GMT 2012
Rank15Aligned Residues345
% Identity25%Templatec1kevB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:nadp-dependent alcohol dehydrogenase; PDBTitle: structure of nadp-dependent alcohol dehydrogenase
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  SRAAVAFAPGKPLEIVEIDVAPPKKGEVLIKVTHTGVCHTDAFTLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGD
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Template Sequence  MKGFAMLGINK. LGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILGHEAVGEVVEVGSEVKDFKPGD
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   1........10. ........20.........30.........40.........50.........60.........70.........
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  HVIPLYTAECGECEFCRSGKTNLCVAVRETQGKGLMPDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHE
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Template Sequence  RVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVFGEYF. . . . . . . . . . . . . . . . HVNDADMNLAILPKDMPLE
Template Known Secondary structure 
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SSST
GGGTTSTTTT

BTTTB

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   80.........90.........100.........110.........120.... .....130.........140...
 
   163......170.........180.........190.........200.........210.........220.........230.........240..
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Query Sequence  HVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPKKFDLARRFGATDCINPNDYD
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Template Sequence  NAVMITDMMTTGFHGAELA. DIQMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNGH
Template Known Secondary structure  TTTTT.T

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STTT
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   144.....150.........160.. .......170.........180.........190.........200.........210.........220..
 
   243......250.........260.........270.........280.........290.........300.........310........ .320.
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Query Sequence  KPIKDVLLDINKWGIDHTFECIGNVNVMRAALESAHRGWGQSVIIGVAVAGQEISTRPFQLVTGRVWKGSAFGGVK. GRS
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Template Sequence  I. VDQVMKLTNGKGVDRVIMAGGGSETLSQAVSM. VKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPGGRL
Template Known Secondary structure  .TT


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   223 ......230.........240.........250..... ....260.........270.........280.........290.........300
 
   322.......330.........340..... ....350.........360.. .....
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Query Sequence  QLPGMVEDAMKGDIDLEPFVTHTM. SLDEINDAFDLMHEGKS. . IRTVI
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Template Sequence  RAEMLRDMVVYNRVDLSKLVTHVYHGFDHIEEALLLMKDKPKDLIKAVV
Template Known Secondary structure  TTSS
GGGGSGGG

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   301........310.........320.........330.........340.........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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