Return to main results Retrieve Phyre Job Id

Job DescriptionP39406
Confidence53.95%DateThu Jan 5 12:00:42 GMT 2012
Rank461Aligned Residues125
% Identity17%Templated1x7da_
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Ornithine cyclodeaminase-like
Resolution1.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   184.....190.........200.........210. ........220.........230.........240.........250.........260.
Predicted Secondary structure 











..






















Query SS confidence 



























. .

















































Query Sequence  GSQLLLSTLTPHTKGKVLDVGCGAGVLS. . VAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEVKGR
Query Conservation      

  
       




 
 
   ..               
        
        
       
        
Alig confidence 



























..































.
















Template Conservation   




  


  
  
 




 

   
 

  
  
  
 
  
  
    

  
   . 
  
      
 

  
Template Sequence  TSLXAAQALARPNARKXALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEY. SGLTIRRASSVAEAVKG
Template Known Secondary structure  S
TT



STTS



SSTT
.TT

SSTT
Template Predicted Secondary structure 















.





Template SS confidence 















































































   116...120.........130.........140.........150.........160.........170....... ..180.........190....
 
   262...... .270.........280.........290.........300.........310.........320......
Predicted Secondary structure  .......


















Query SS confidence 






. . . . . . .

























































Query Sequence  FDMIISN. . . . . . . PPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANAFLPYPDVLDETFGFHEVIAQT
Query Conservation   
 

 
.......

 
                    
 


 
  
 
  
 
   
             
Alig confidence 






.......




.................



































Template Conservation 



 


 
    
    .................  

 
 

  


  
   


   
  
 



 
Template Sequence  VDIITTVTADKAYATIITP. . . . . . . . . . . . . . . . . DXLEPGXHLNAVGGDCPGKTELHADVLRNARVFVEY
Template Known Secondary structure 
S



SS
G.................GG

TT

S

BTTB
TSSS
Template Predicted Secondary structure 









.................



















Template SS confidence 







































































   195....200.........210... ......220.........230.........240.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions