Return to main results Retrieve Phyre Job Id

Job DescriptionP39406
Confidence99.76%DateThu Jan 5 12:00:42 GMT 2012
Rank79Aligned Residues140
% Identity17%Templated1nt2a_
SCOP infoS-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases Fibrillarin homologue
Resolution2.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   192.......200.........210.........220.........230.........240.........250.... .....260.......
Predicted Secondary structure 



























....






Query SS confidence 






























































. . . .












Query Sequence  LTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNV. . . . FSEVKGRFDMIIS
Query Conservation 
       




 
 
                  
        
        
       
 ....        
 

 
Alig confidence 






























































....












Template Conservation    
  
  


 
 
 
     

     
 
 


 
   
  
   
        
                 
 
  
Template Sequence  LKLRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLIYQ
Template Known Secondary structure 



SS
T
TTSTTTS



SS
S
TT
GGGTTTT


Template Predicted Secondary structure 


































Template SS confidence 















































































   53......60.........70.........80.........90.........100.........110.........120.........130..
 
   268.270.........280.........290.........300...... ...310.........320.........330.........340..
Predicted Secondary structure 














.....









Query SS confidence 






































. . . . .



































Query Sequence  NPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANAF. . . . . LPYPDVLDETFGFHEVIAQTGRFKVYRAIMTRQAKK
Query Conservation 


 
                    
 


 
  
 
  .....
 
   
               
 
           
Alig confidence 



.......



























.....













.....
















Template Conservation      .......       
    
 




 


               
  
    
.....  

 


   
 
   
Template Sequence  DIAQ. . . . . . . KNQIEILKANAEFFLKEKGEVVIMVKARSIDSTAEPEEVFKSVLKEM. . . . . EGDFKIVKHGSLMPYHR
Template Known Secondary structure 


S.......TT
TTS
.....TTS
TTT
T
Template Predicted Secondary structure 



.......













.....







Template SS confidence 















































































   133... ...140.........150.........160.........170.........180... ......190.........200
 
   343
Predicted Secondary structure 
Query SS confidence 
Query Sequence  G
Query Conservation   
Alig confidence 
Template Conservation   
Template Sequence  D
Template Known Secondary structure  T
Template Predicted Secondary structure 
Template SS confidence 
   201
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions