Return to main results Retrieve Phyre Job Id

Job DescriptionP39406
Confidence85.58%DateThu Jan 5 12:00:42 GMT 2012
Rank382Aligned Residues112
% Identity15%Templated1i10a1
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains LDH N-terminal domain-like
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   193......200....... ..210.........220.........230.........240.. .......250.........260......
Predicted Secondary structure 









..








....














Query SS confidence 














. .


































. . . .























Query Sequence  TPHTKGKVLDVGCGA. . GVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAA. . . . NGVEGEVFASNVFSEVKGRFDMII
Query Conservation         




 
 ..
                  
        
      ....  
       
         
 

Alig confidence 














..


































....























Template Conservation        







 

  

   
  
   

 
 

          

                    
  





 
Template Sequence  EQTPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLRTPKIVSGKDYNVTANSKLVIIT
Template Known Secondary structure 



SS

STT

S
S
TTGGG
S


SSGGGGTT
S
Template Predicted Secondary structure 




























Template SS confidence 















































































   15....20.........30.........40.........50.........60.........70.........80.........90....
 
   267..270.........280... ......290.... .....300....
Predicted Secondary structure 







..

...


Query SS confidence 
















. .










. . .









Query Sequence  SNPPFHDGMQTSLDAAQ. . TLIRGAVRHLN. . . SGGELRIVAN
Query Conservation   


 
           ..         
 ...


 
  
 
Alig confidence 
















..










...









Template Conservation   
        
 

   
  
   
   
    
 







Template Sequence  AGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPNCKLLIVSN
Template Known Secondary structure 
S



TT

GGGG
TT

SS
Template Predicted Secondary structure 














Template SS confidence 










































   95....100.........110.........120.........130.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions