 |
Job Description | P39406 | Confidence | 96.91% | Date | Thu Jan 5 12:00:42 GMT 2012 |
Rank | 312 | Aligned Residues | 74 |
% Identity | 14% | Template | d1dcta_ |
SCOP info | S-adenosyl-L-methionine-dependent methyltransferases
| S-adenosyl-L-methionine-dependent methyltransferases
| C5 cytosine-specific DNA methylase, DCM
|
Resolution | 2.80 |
|
 |
  |   |
199 | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | |
|
|
260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
| . | . | . |
|
|  |  |  |  |  |  |  |
|
|  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | V | L | D | V | G | C | G | A | G | V | L | S | V | A | F | A | R | H | S | P | K | I | R | L | T | L | C | D | V | S | A | P | A | V | E | A | S | R | A | T | L | A | A | N | G | V | E | G | E | V | F | A | S | N | V | F | S | E | V | K | . |
. |
. |
G | R | F | D | M | I | I | S | N | P | P | F | H | D | G | M |
Query Conservation |   |
  |
|
|
|
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   | . | . | . |   |   |   |
|   |
|
|   |
|
|
|   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|
|
|
|   |
|
|   |   |   |
|
|   |   |
|
|   |   | . |   |
|   |
|   |
|   |
|   |   |
|   |   |   |
|   |   |
|   |   | . | . | . | . | . |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |   |
|   |
|
|
|   |
|
|
Template Sequence |   |
N | L | I | S | L | F | S | G | A | G | G | L | D | L | G | F | Q | K | A | G | F | R | . |
I | I | C | A | N | E | Y | D | K | S | I | W | K | T | Y | E | S | N | H | S | . |
. |
. |
. |
. |
A | K | L | I | K | G | D | I | S | K | I | S | S | D | E | F | P | K | C | D | G | I | I | G | G | P | P | C | Q | S | W | S |
Template Known Secondary structure |   |
 |  |  |  |  | S |
| S | S |
|  |  |  |  |  |  |  |  |  | T |
|  | . |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | S |  |  |  |  | S |
| T | T | T | S |
| G | G | G | S |
|
|
| S |  |  |  |  |
|
|
|
| T | T | T | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  | . |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . |
|
|  |  |  |
|
|  |  |  |
|
|  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | |
. | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | |
|
|
|
|
. | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . |
  |
  |   |
276 | . | . |
Predicted Secondary structure |   |
|
|
|
Query SS confidence |   |
|
|
|
Query Sequence |   |
Q | T | S |
Query Conservation |   |
  |   |   |
Alig confidence |   |
|
|
|
Template Conservation |   |
  |
|
|
Template Sequence |   |
E | G | G |
Template Known Secondary structure |   |
S | S | S |
Template Predicted Secondary structure |   |
 |
|
|
Template SS confidence |   |
|
|
|
  |   |
76 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|