 |
Job Description | P39406 | Confidence | 98.28% | Date | Thu Jan 5 12:00:42 GMT 2012 |
Rank | 296 | Aligned Residues | 94 |
% Identity | 20% | Template | c3ssoE_ |
PDB info |
PDB header:transferase | Chain: E: PDB Molecule:methyltransferase; |
PDBTitle: myce methyltransferase from the mycinamycin biosynthetic pathway in2 complex with mg and sah, crystal form 2
|
Resolution | 1.90 Å |
|
 |
  |   |
194 | . | . | . | . | . | 200 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
. | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
Query Sequence |   |
P | H | T | K | G | K | V | L | D | V | G | C | G | A | . |
. |
. |
. |
. |
. |
. |
G | V | L | S | V | A | F | A | R | H | S | P | K | I | R | L | T | L | C | D | V | S | A | P | A | V | E | A | S | R | A | T | L | A | A | N | G | V | E | G | E | V | F | A | S | N | V | F | S | . |
. |
. |
. |
. |
. |
. |
. |
E | V |
Query Conservation |   |
  |   |   |   |   |   |
|
|
|
|
|   |
|   | . | . | . | . | . | . | . |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   | . | . | . | . | . | . | . | . |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
Template Conservation |   |
|
|   |
|
|   |
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|
|
|   |
|   |
|   |
|
|
|
|   |   |
|   | . | . | . | . | . | . | . | . |   |   |   |   |   |
|
|   |
|   |   |
|
|
|   |
|   |   |
|
|   |   |
|   |   |
|
Template Sequence |   |
R | N | Q | Q | V | R | V | L | E | I | G | V | G | G | Y | K | H | P | E | W | G | G | G | S | L | R | M | W | K | S | F | F | P | R | G | Q | I | Y | G | L | D | I | M | D | K | S | . |
. |
. |
. |
. |
. |
. |
. |
H | V | D | E | L | R | I | R | T | I | Q | G | D | Q | N | D | A | E | F | L | D | R | I | A | R | R |
Template Known Secondary structure |   |
T | T | S |
|
|  |  |  |  |  |
|
| S |
| T | T |
| S | S |
|
|
|  |  |  |  |  |  |  |  |  |
| T | T |
|  |  |  |  |  |  | S | S |
|
| G | . | . | . | . | . | . | . | . | G | G |
| B | T | T |  |  |  |  |  |
|
| T | T |
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  | . | . | . | . | . | . | . | . |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
194 | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . |
  |
  |   |
259 | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |
|
|  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | G | R | F | D | M | I | I | S | N | P | P | F | H | D | G | M | Q | T | S | L | D | A | A | Q | T | L | I | R | G | A | V | R | H | L | N | S | G | G | E | L | R | I |
Query Conservation |   |
  |   |   |   |
|   |
|
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|   | . |   |   |
|
|
|   |
|
|   |   |
|
|
|   |
|   |   |
|
|
|
|
|
|
Template Sequence |   |
Y | G | P | F | D | I | V | I | . |
. |
. |
. |
. |
D | D | G | S | H | I | . |
N | A | H | V | R | T | S | F | A | A | L | F | P | H | V | R | P | G | G | L | Y | V | I |
Template Known Secondary structure |   |
 |
|
|  |  |  |  |  | . | . | . | . | . |  |
| S |
|
|
| . |  |  |  |  |  |  |  |  |  |  |  | G | G | G |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  | . | . | . | . | . |  |
|
|
|
|
| . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
266 | . | . | . | 270 | . | . | . | |
|
|
|
|
. | . | . | . | . | . | |
280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|