Return to main results Retrieve Phyre Job Id

Job DescriptionP39406
Confidence85.59%DateThu Jan 5 12:00:42 GMT 2012
Rank381Aligned Residues107
% Identity15%Templatec3qhaB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:putative oxidoreductase; PDBTitle: crystal structure of a putative oxidoreductase from mycobacterium2 avium 104
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   197..200.........210.........220.........230.........240.........250.........260.........270......
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  KGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEVKGRFDMIISNPPFHDGMQ
Query Conservation     




 
 
                  
        
        
       
         
 

 


 
    
Alig confidence 










































........






















......
Template Conservation   


 




 

   
  
   
  
    
       
   ........
                

    ......
Template Sequence  QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEA. . . . . . . . GATLADSVADVAAADLIHITVLD. . . . . .
Template Known Secondary structure 




STTGGGSTT

S
TT........T

SSTTSS

SS......
Template Predicted Secondary structure 










........









......
Template SS confidence 















































































   11........20.........30.........40.........50... ......60.........70......
 
   277..280.........290.........300.........310.........
Predicted Secondary structure 











Query SS confidence 










































Query Sequence  TSLDAAQTLIRGAVRHLNSGGELRIVANAFLPYPDVLDETFGF
Query Conservation                  
 


 
  
 
  
 
   
      
Alig confidence  ..








































Template Conservation  ..                     
                   
Template Sequence  . . DAQVREVVGELAGHAKPGTVIAIHSTISDTTAVELARDLKA
Template Known Secondary structure  ..TT

TT

S


GG
Template Predicted Secondary structure  ..











Template SS confidence 










































   77..80.........90.........100.........110.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions