Job Description P39406 Confidence 99.80% Date Thu Jan 5 12:00:42 GMT 2012 Rank 38 Aligned Residues 148 % Identity 19% Template c3q87B_ PDB info PDB header:transferase activator/transferase Chain: B: PDB Molecule:n6 adenine specific dna methylase; PDBTitle: structure of eukaryotic translation termination complex2 methyltransferase mtq2-trm112 Resolution 2.00 Å

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		180	.	.	.	.	.	.	.	.	.	190	.	.			.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure															.	.
Query SS confidence															.	.
Query Sequence		G	L	D	V	G	S	Q	L	L	L	S	T	L	.	.	T	P	H	T	K	G	K	V	L	D	V	G	C	G	A	G	V	L	S	V	A	F	A	R	H	S	P	K	I	R	L	T	L	C	D	V	S	A	P	A	V	E	A	S	R	A	T	L	A	A	N	G	V	E	G	E	V	F	A	S	N	V	F	S	E
Query Conservation															.	.
Alig confidence															.	.																									.	.	.																					.	.	.	.	.	.	.
Template Conservation																																									.	.	.																					.	.	.	.	.	.	.
Template Sequence		E	P	G	E	D	T	Y	T	L	M	D	A	L	E	R	E	G	L	E	M	K	I	V	L	D	L	G	T	S	T	G	V	I	T	E	Q	L	R	K	.	.	.	R	N	T	V	V	S	T	D	L	N	I	R	A	L	E	S	H	R	G	G	.	.	.	.	.	.	.	N	L	V	R	A	D	L	L	C	S	I
Template Known Secondary structure																		T			S							T		T	T								T	T	.	.	.	T	S							S							T		S	S	S	.	.	.	.	.	.	.						S	T	T	T	T	S
Template Predicted Secondary structure																																									.	.	.																					.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.				.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.								.	.	.	.	.	.	70	.	.	.	.
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.					.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.			.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.																																	.	.																										.	.
Query SS confidence																	.	.	.	.																																	.	.																										.	.
Query Sequence		V	K	G	R	F	D	M	I	I	S	N	P	P	F	H	.	.	.	.	D	G	M	Q	T	S	L	D	A	A	Q	T	L	I	R	G	A	V	R	H	L	N	S	G	G	E	L	R	I	V	A	N	.	.	A	F	L	P	Y	P	D	V	L	D	E	T	F	G	F	H	E	V	I	A	Q	T	G	R	F	.	.
Query Conservation																	.	.	.	.																																	.	.																										.	.
Alig confidence																	.	.	.	.																																	.	.																										.	.
Template Conservation
Template Sequence		N	Q	E	S	V	D	V	V	V	F	N	P	P	Y	V	P	D	T	D	D	P	I	I	G	G	G	Y	L	G	R	E	V	I	D	R	F	V	D	A	V	T	V	G	M	L	Y	L	L	V	I	E	A	N	R	P	K	E	V	L	A	R	L	E	E	R	G	Y	G	T	R	I	L	K	V	R	K	I	L	G	E
Template Known Secondary structure			G	G	G		S									B	T	T				T	T	T	B			G	G	G													S	S								G	G	G												T	T												S	S	S
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
				330	.	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	K	V	Y	R	A	I	M	T
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		T	V	Y	I	I	K	G	E	K	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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