Job Description P39406 Confidence 99.44% Date Thu Jan 5 12:00:42 GMT 2012 Rank 251 Aligned Residues 144 % Identity 20% Template c3p9kD_ PDB info PDB header:transferase Chain: D: PDB Molecule:caffeic acid o-methyltransferase; PDBTitle: crystal structure of perennial ryegrass lpomt1 complexed with s-2 adenosyl-l-homocysteine and coniferaldehyde Resolution 2.25 Å

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		183	.	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		V	G	S	Q	L	L	L	S	T	L	T	.	P	H	T	K	G	K	V	L	D	V	G	C	G	A	G	V	L	S	V	A	F	A	R	H	S	P	K	I	R	L	T	L	C	D	V	S	A	P	A	V	E	A	S	R	A	T	L	A	A	N	G	V	E	G	E	V	F	A	S	N	V	F	S	E	V	K	G	R
Query Conservation													.
Alig confidence													.																																								.	.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.	.
Template Sequence		I	I	T	K	K	L	L	E	L	Y	H	G	F	E	G	L	G	T	L	V	D	V	G	G	G	V	G	A	T	V	A	A	I	A	A	H	Y	P	T	I	K	G	V	N	F	D	L	P	H	V	I	.	.	.	.	.	.	.	S	E	A	P	Q	F	P	G	V	T	H	V	G	G	D	M	F	K	E	V	P	S
Template Known Secondary structure													T	T	T	T		S						T		T	T	S											T	T													.	.	.	.	.	.	.	T	T					T	T						S		T	T	T
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.								.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.																																	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	D	M	I	I	S	N	P	P	F	H	D	G	M	Q	T	S	L	D	A	A	Q	T	L	I	R	G	A	V	R	H	L	N	S	G	G	E	L	R	I	V	A	N	A	F	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.
Template Sequence		G	D	T	I	L	M	K	W	I	L	H	.	.	.	D	W	S	D	Q	H	C	A	T	L	L	K	N	C	Y	D	A	L	P	A	H	G	K	V	V	L	V	Q	C	I	L	P	V	N	P	E	A	N	P	S	S	Q	G	V	F	H	V	D	M	I	M	L	A	H	N	P	G	G	R	E	R	Y	E	R	E	F
Template Known Secondary structure			S						S		G	G	.	.	.	G	B																S		T	T										B		S	S			S	S																	S	S	B					B
Template Predicted Secondary structure													.	.	.
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.				.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
		310	.	.	.	.	.	.		.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		P	D	V	L	D	E	T	.	F	G	F	H	E	V	I	A	Q	T	G	R	F	K	V	Y	R	A	I	M
Query Conservation									.
Alig confidence									.
Template Conservation
Template Sequence		Q	A	L	A	R	G	A	G	F	T	G	V	K	S	T	Y	I	Y	A	N	A	W	A	I	E	F	T	K
Template Known Secondary structure									T											T	T
Template Predicted Secondary structure
Template SS confidence
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions