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Job Description | P39406 | Confidence | 79.00% | Date | Thu Jan 5 12:00:42 GMT 2012 |
Rank | 398 | Aligned Residues | 109 |
% Identity | 17% | Template | c3p7mC_ |
PDB info |
PDB header:oxidoreductase | Chain: C: PDB Molecule:malate dehydrogenase; |
PDBTitle: structure of putative lactate dehydrogenase from francisella2 tularensis subsp. tularensis schu s4
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Resolution | 2.20 Å |
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195 | . | . | . | . | 200 | . | . | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query Sequence |   |
H | T | K | G | K | V | L | D | V | G | C | G | A | . |
G | V | L | S | V | A | F | A | R | H | S | P | K | I | R | L | T | L | C | D | V | S | A | P | A | V | E | . |
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A | S | R | A | T | L | A | A | N | G | V | E | G | E | V | F | A | S | N | V | F | S | E | V | K | G | R | F | D | M | I | I | S | N | P |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
X | A | R | K | K | I | T | L | V | G | A | G | N | I | G | G | T | L | A | H | L | A | L | I | K | Q | L | G | D | V | V | L | F | D | I | A | Q | G | X | P | N | G | K | A | L | D | L | L | Q | T | C | P | I | E | G | V | D | F | K | V | R | G | T | N | D | Y | K | D | L | E | N | S | . |
D | V | V | I | V | T | A |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | |
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270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
P | F | H | D | G | M | Q | T | S | L | D | A | A | Q | . |
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T | L | I | R | G | A | V | R | H | L | N | . |
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S | G | G | E | L | R | I | V | A | N |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
G | V | P | R | K | P | G | X | S | R | D | D | L | L | G | I | N | I | K | V | X | Q | T | V | G | E | G | I | K | H | N | C | P | N | A | F | V | I | C | I | T | N |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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