Job Description P39406 Confidence 99.74% Date Thu Jan 5 12:00:42 GMT 2012 Rank 91 Aligned Residues 143 % Identity 16% Template c3opnA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative hemolysin; PDBTitle: the crystal structure of a putative hemolysin from lactococcus lactis Resolution 2.05 Å

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		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.			.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure																																																														.	.
Query SS confidence																																																														.	.
Query Sequence		Q	L	L	L	S	T	L	T	P	H	T	K	G	K	V	L	D	V	G	C	G	A	G	V	L	S	V	A	F	A	R	H	S	P	K	I	R	L	T	L	C	D	V	S	A	P	A	V	E	A	S	R	A	T	L	A	A	N	G	V	.	.	E	G	E	V	F	A	S	N	V	F	S	E	V	K	G	R	F	D
Query Conservation																																																														.	.
Alig confidence																																					.																									.	.
Template Conservation																																					.
Template Sequence		K	A	L	K	E	F	H	L	E	I	N	G	K	T	C	L	D	I	G	S	S	T	G	G	F	T	D	V	X	L	Q	N	G	A	K	.	L	V	Y	A	L	D	V	G	T	N	Q	L	A	W	K	I	R	S	D	E	R	V	V	V	X	E	Q	F	N	F	R	N	A	V	L	A	D	F	E	Q	G	R	P	S
Template Known Secondary structure							T	T				T	T							T		T	T	S									T	T		S	.							S	S										T		T	T						S			G	G	G			G	G	G			S				S
Template Predicted Secondary structure																																					.
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.													.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	I	I	S	N	P	P	F	H	D	G	M	Q	T	S	L	D	A	A	Q	T	L	I	R	G	A	V	R	H	L	N	S	G	G	E	L	R	I	V	A	.	.	.	.	.	.	.	.	.	.	.	.	N	A	F	L	P	Y	P	D	V	L	D	E	T	F	G	F	H	E	V	I	A	Q	T	G	R	F	K	V
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.
Template Sequence		F	T	S	I	D	V	S	F	I	S	L	D	L	I	.	.	.	.	.	.	.	.	L	P	P	L	Y	E	I	L	E	K	N	G	E	V	A	A	L	I	K	P	Q	F	E	A	G	R	E	Q	V	G	N	G	I	I	R	D	P	K	V	H	Q	X	T	I	E	K	V	L	K	T	A	T	Q	L	G	F	S	V
Template Known Secondary structure								S	S	S		G	G	G	T	.	.	.	.	.	.	.	.								S		T	T													S																															T
Template Predicted Secondary structure																.	.	.	.	.	.	.	.
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.									.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		332	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	R	A	I	M	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	G	L	T	F	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		198	.	200	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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