Job Description P39406 Confidence 99.53% Date Thu Jan 5 12:00:42 GMT 2012 Rank 229 Aligned Residues 141 % Identity 13% Template c3ndjA_ PDB info PDB header:transferase Chain: A: PDB Molecule:methyltransferase; PDBTitle: x-ray structure of a c-3'-methyltransferase in complex with s-2 adenosyl-l-homocysteine and sugar product Resolution 1.50 Å

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		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure																																																																.
Query SS confidence																																																																.
Query Sequence		S	Q	L	L	L	S	T	L	T	P	H	T	K	G	K	V	L	D	V	G	C	G	A	G	V	L	S	V	A	F	A	R	H	S	P	K	I	R	L	T	L	C	D	V	S	A	P	A	V	E	A	S	R	A	T	L	A	A	N	G	V	E	.	G	E	V	F	A	S	N	V	F	S	E	V	K	G	R	F	D
Query Conservation																																																																.
Alig confidence																																					.	.																										.
Template Conservation																																					.	.
Template Sequence		A	R	D	F	L	A	T	E	L	T	G	P	D	P	F	I	V	E	I	G	C	N	D	G	I	M	L	R	T	I	Q	E	A	G	V	.	.	R	H	L	G	F	E	P	S	S	G	V	A	A	K	A	R	E	K	G	I	R	V	R	T	D	F	F	E	K	A	T	A	D	D	V	R	R	T	E	G	P	A	N
Template Known Secondary structure								T	T	T		S	S	S							S		T	T	T	T	T							T	T		.	.							S										T	T	T						S			S
Template Predicted Secondary structure																																					.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.			.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.																	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	I	I	S	N	P	P	F	H	D	G	M	Q	T	S	L	D	A	A	Q	T	L	I	R	G	A	V	R	H	L	N	S	G	G	E	L	R	I	V	A	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	F	L	P	Y	P	D	V	L	D	E	T	F	G	F	H	E	V	I	A	Q	T	G
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Template Conservation											.	.	.	.	.																																																									.	.	.	.	.
Template Sequence		V	I	Y	A	A	N	T	L	C	.	.	.	.	.	H	I	P	Y	V	Q	S	V	L	E	G	V	D	A	L	L	A	P	D	G	V	F	V	F	E	D	P	Y	L	G	D	I	V	A	K	T	S	F	D	Q	I	Y	D	E	H	F	F	L	F	S	A	T	S	V	Q	G	.	.	.	.	.	M	A	Q	R	C
Template Known Secondary structure							S		G	G	.	.	.	.	.	G		S																																	T		G	G	G		S	T	T													.	.	.	.	.				T	T
Template Predicted Secondary structure											.	.	.	.	.																																																									.	.	.	.	.
Template SS confidence
		172	.	.	.	.	.	.	.	180						.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.						.	.	.	240	.
		328	.	330	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	F	K	V	Y	R	A	I	M	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	F	E	L	V	D	V	Q	R	L
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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