Job Description P39406 Confidence 99.77% Date Thu Jan 5 12:00:42 GMT 2012 Rank 67 Aligned Residues 139 % Identity 20% Template c3mtiA_ PDB info PDB header:transferase Chain: A: PDB Molecule:rrna methylase; PDBTitle: the crystal structure of a rrna methylase from streptococcus2 thermophilus to 1.95a Resolution 1.95 Å

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		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		D	G	L	D	V	G	S	Q	L	L	L	S	T	L	T	P	H	T	K	G	K	V	L	D	V	G	C	G	A	G	V	L	S	V	A	F	A	R	H	S	P	K	I	R	L	T	L	C	D	V	S	A	P	A	V	E	A	S	R	A	T	L	A	A	N	G	V	E	.	G	E	V	F	A	S	N	V	F	S	E
Query Conservation																																																																						.
Alig confidence																.																											.	.																										.
Template Conservation																.																											.	.
Template Sequence		K	R	P	I	H	X	S	H	D	F	L	A	E	V	.	L	D	D	E	S	I	V	V	D	A	T	X	G	N	G	N	D	T	A	F	L	A	G	L	S	K	.	.	K	V	Y	A	F	D	V	Q	E	Q	A	L	G	K	T	S	Q	R	L	S	D	L	G	I	E	N	T	E	L	I	L	D	G	H	E	N	L
Template Known Secondary structure														T	T	.			T	T						S			T	T	S								T	T	S	S	.	.							S																T									S		G	G	G	G
Template Predicted Secondary structure																.																											.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.			.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		258				.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure			.	.	.
Query SS confidence			.	.	.
Query Sequence		V	.	.	.	K	G	R	F	D	M	I	I	S	N	P	P	F	H	D	G	M	Q	T	S	L	D	A	A	Q	T	L	I	R	G	A	V	R	H	L	N	S	G	G	E	L	R	I	V	A	N	A	F	L	P	Y	P	D	V	L	D	E	T	F	G	F	H	E	V	I	A	Q	T	G	R	F	K	V	Y	R
Query Conservation			.	.	.
Alig confidence			.	.	.														.	.	.	.	.	.	.																														.	.											.	.	.	.
Template Conservation																			.	.	.	.	.	.	.																														.	.											.	.	.	.
Template Sequence		D	H	Y	V	R	E	P	I	R	A	A	I	F	N	L	G	K	.	.	.	.	.	.	.	P	H	T	T	L	E	A	I	E	K	I	L	D	R	L	E	V	G	G	R	L	A	I	X	I	Y	D	X	E	.	.	K	D	A	V	L	E	Y	V	I	G	.	.	.	.	L	D	Q	R	V	F	T	A	X	L
Template Known Secondary structure		G	G	T			S												.	.	.	.	.	.	.																														.	.											.	.	.	.	S		T	T	T
Template Predicted Secondary structure																			.	.	.	.	.	.	.																														.	.											.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.								.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.			.	.	.	.	130	.	.	.	.	.					.	.	.	.	140	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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