Job Description P39406 Confidence 99.51% Date Thu Jan 5 12:00:42 GMT 2012 Rank 237 Aligned Residues 125 % Identity 18% Template c3lkdB_ PDB info PDB header:transferase Chain: B: PDB Molecule:type i restriction-modification system PDBTitle: crystal structure of the type i restriction-modification2 system methyltransferase subunit from streptococcus3 thermophilus, northeast structural genomics consortium4 target sur80 Resolution 2.25 Å

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		181	.	.	.	.	.	.	.	.	190	.	.					.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.				.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.				.	.	.	.	250
Predicted Secondary structure														.	.	.	.																										.	.	.																													.	.	.
Query SS confidence														.	.	.	.																										.	.	.																													.	.	.
Query Sequence		L	D	V	G	S	Q	L	L	L	S	T	L	.	.	.	.	T	P	H	T	K	G	K	V	L	D	V	G	C	G	A	G	V	L	S	V	A	F	A	R	H	.	.	.	S	P	K	I	R	L	T	L	C	D	V	S	A	P	A	V	E	A	S	R	A	T	L	A	A	N	G	V	.	.	.	E	G	E	V	F
Query Conservation														.	.	.	.																										.	.	.																													.	.	.
Alig confidence														.	.	.	.																										.	.	.																													.	.	.
Template Conservation
Template Sequence		P	Q	P	V	A	K	L	X	T	Q	I	A	F	L	G	R	E	D	K	Q	G	F	T	L	Y	D	A	T	X	G	S	G	S	L	L	L	N	A	K	R	Y	S	R	Q	P	Q	T	V	V	Y	F	G	Q	E	L	N	T	S	T	Y	N	L	A	R	X	N	X	I	L	H	G	V	P	I	E	N	Q	F	L	H
Template Known Secondary structure															T	T		T	T		S	S						T	T		T	T	S	T	T	G	G	G						S		G	G	G								S															T	T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
		251	.	.	.	.	.	.	.						.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.																			.	.	.	.	.	.	290	.	.	.	.	.		.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Query SS confidence										.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Query Sequence		A	S	N	V	F	S	E	V	.	.	.	.	.	K	G	R	F	D	M	I	I	S	N	P	P	F	H	D	G	M	Q	T	S	L	D	A	A	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	I	R	G	A	V	R	H	L	N	S	.	G	G	E	L	R	I	V	A	N	A
Query Conservation										.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Alig confidence										.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation
Template Sequence		N	A	D	T	L	D	E	D	W	P	T	Q	E	P	T	N	F	D	G	V	L	X	N	P	P	Y	S	A	K	W	S	A	S	S	G	F	X	D	D	P	R	F	S	P	F	G	K	L	A	P	K	S	K	A	D	F	A	F	L	L	H	G	Y	Y	H	L	K	Q	D	N	G	V	X	A	I	V	L	P	H
Template Known Secondary structure			S		T	T	T	S		S			S	S				B	S								B	T							G	G	G	G	G	S	T	T	T	G	G	G	S	S				T	T													T	B		T	T	T									T
Template Predicted Secondary structure
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions