Job Description P39406 Confidence 93.57% Date Thu Jan 5 12:00:42 GMT 2012 Rank 348 Aligned Residues 122 % Identity 11% Template c3ktdC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:prephenate dehydrogenase; PDBTitle: crystal structure of a putative prephenate dehydrogenase (cgl0226)2 from corynebacterium glutamicum atcc 13032 at 2.60 a resolution Resolution 2.60 Å

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		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	T	K	G	K	V	L	D	V	G	C	G	A	G	V	L	S	V	A	F	A	R	H	S	P	K	I	R	L	T	L	C	D	V	S	A	P	A	V	E	A	S	R	A	T	L	A	A	N	G	V	E	G	E	V	F	A	S	N	V	F	S	E	V	K	G	R	F	D	M	I	I	S	N	P	P	F	H	D	G
Query Conservation
Alig confidence																																														.	.	.	.																													.	.	.	.
Template Conservation																																														.	.	.	.																													.	.	.	.
Template Sequence		D	I	S	R	P	V	C	I	L	G	L	G	L	I	G	G	S	L	L	R	D	L	H	A	A	N	H	S	V	F	G	Y	N	R	S	R	S	G	A	K	S	A	V	D	.	.	.	.	E	G	F	D	V	S	A	D	L	E	A	T	L	Q	R	A	A	A	E	D	A	L	I	V	L	A	V	P	.	.	.	.
Template Known Secondary structure				S	S								S													T	T								S	S										.	.	.	.	T	T					S												T	T							S		.	.	.	.
Template Predicted Secondary structure																																														.	.	.	.																													.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.					.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	Q	T	S	L	D	A	A	Q	T	L	I	R	G	A	V	R	H	L	N	S	G	G	E	L	R	I	V	A	N	A	F	L	P	Y	P	D	V	L	D	E	T	F	G	F	H	E	V	I	A	Q	T	G	R	F
Query Conservation
Alig confidence		.	.	.	.														.
Template Conservation		.	.	.	.														.
Template Sequence		.	.	.	.	X	T	A	I	D	S	L	L	D	A	V	H	T	.	H	A	P	N	N	G	F	T	D	V	V	S	V	K	T	A	V	Y	D	A	V	K	A	R	N	X	Q	H	R	Y	V	G	S	H	P	X	A
Template Known Secondary structure		.	.	.	.														.			T	T								S		S										T	T		G	G	G	B						T	T
Template Predicted Secondary structure		.	.	.	.														.
Template SS confidence
						77	.	.	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions