Job Description P39406 Confidence 99.37% Date Thu Jan 5 12:00:42 GMT 2012 Rank 254 Aligned Residues 139 % Identity 12% Template c3hp7A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hemolysin, putative; PDBTitle: putative hemolysin from streptococcus thermophilus. Resolution 1.53 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.							.	.	.	.	.	.	.
Predicted Secondary structure																																																																					.	.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.	.
Query Sequence		Q	L	L	L	S	T	L	T	P	H	T	K	G	K	V	L	D	V	G	C	G	A	G	V	L	S	V	A	F	A	R	H	S	P	K	I	R	L	T	L	C	D	V	S	A	P	A	V	E	A	S	R	A	T	L	A	A	N	G	V	E	G	E	V	F	A	S	.	.	.	.	.	.	N	V	F	S	E	V	K
Query Conservation																																																																					.	.	.	.	.	.
Alig confidence																																					.																		.	.	.	.											.	.	.	.	.	.
Template Conservation																																					.																		.	.	.	.
Template Sequence		K	A	L	A	V	F	N	L	S	V	E	D	X	I	T	I	D	I	G	A	S	T	G	G	F	T	D	V	X	L	Q	N	G	A	K	.	L	V	Y	A	V	D	V	G	T	N	Q	L	V	W	K	L	R	.	.	.	.	Q	D	D	R	V	R	S	X	E	Q	Y	N	F	R	Y	A	E	P	V	D	F	T	E
Template Known Secondary structure							T	T				T	T							T		T	T	S									T	T		S	.							S	S	S	S		S						.	.	.	.	T		T	T						S			G	G	G			G	G	G		T	T
Template Predicted Secondary structure																																					.																		.	.	.	.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.					.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.													.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	R	F	D	M	I	I	S	N	P	P	F	H	D	G	M	Q	T	S	L	D	A	A	Q	T	L	I	R	G	A	V	R	H	L	N	S	G	G	E	L	R	I	.	.	.	.	.	.	.	.	.	.	.	.	V	A	N	A	F	L	P	Y	P	D	V	L	D	E	T	F	G	F	H	E	V	I	A	Q	T	G
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.
Template Sequence		G	L	P	S	F	A	S	I	D	V	S	F	I	S	L	N	L	I	.	.	.	.	.	.	.	.	L	P	A	L	A	K	I	L	V	D	G	G	Q	V	V	A	L	V	K	P	Q	F	E	A	G	R	E	Q	I	G	N	G	I	V	R	E	S	S	I	H	E	K	V	L	E	T	V	T	A	F	A	V	D	Y
Template Known Secondary structure					S							S	S	S		G	G	G	T	.	.	.	.	.	.	.	.								S		T	T									G	G	G	T	S		G	G	G																										T
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.									.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		328	.	330	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	F	K	V	Y	R	A	I	M	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	F	S	V	K	G	L	D	F	S
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		220	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions