Return to main results Retrieve Phyre Job Id

Job DescriptionP39406
Confidence99.55%DateThu Jan 5 12:00:42 GMT 2012
Rank209Aligned Residues106
% Identity15%Templatec3gdhC_
PDB info PDB header:transferaseChain: C: PDB Molecule:trimethylguanosine synthase homolog; PDBTitle: methyltransferase domain of human trimethylguanosine2 synthase 1 (tgs1) bound to m7gtp and adenosyl-homocysteine3 (active form)
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   185....190.. .......200.........210.........220.........230.........240...... ...250.........260
Predicted Secondary structure 
.






















..









.
Query SS confidence 







.





















































. .













.
Query Sequence  SQLLLSTL. TPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVE. . GEVFASNVFSEVKG.
Query Conservation     

  
.       




 
 
                  
        
        
 ..      
       .
Alig confidence 







.

























..

























..













.
Template Conservation 
  

           


  

 
     

   ..  
  

 
   
  
  
         
     
        
Template Sequence  AEHIAGRVSQSFKCDVVVDAFCGVGGNTIQFALTG. . MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLASFL
Template Known Secondary structure  TSTT

TT
TTSTT..
S
TT
GGGS
GGG
Template Predicted Secondary structure 










..















Template SS confidence 















































































   678.680.........690.........700.........710.. .......720.........730.........740.........750.....
 
   261........270.........280.........290.......
Predicted Secondary structure 













Query SS confidence 




































Query Sequence  RFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGG
Query Conservation    
 

 


 
                    
 


Alig confidence 



















.....











Template Conservation    
 

  

          .....   
        
Template Sequence  KADVVFLSPPWGGPDYATAE. . . . . TFDIRTMMSPDG
Template Known Secondary structure 

S




SGGGGGSS.....SB
TTTSSSS
Template Predicted Secondary structure 









.....



Template SS confidence 




































   756...760.........770..... ....780.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions