Job Description P39406 Confidence 96.98% Date Thu Jan 5 12:00:42 GMT 2012 Rank 308 Aligned Residues 131 % Identity 18% Template c3g7uA_ PDB info PDB header:transferase Chain: A: PDB Molecule:cytosine-specific methyltransferase; PDBTitle: crystal structure of putative dna modification methyltransferase2 encoded within prophage cp-933r (e.coli) Resolution 1.75 Å

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		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.											.	.	.	.	.	.
Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.	.	.	.
Query Sequence		K	V	L	D	V	G	C	G	A	G	V	L	S	V	A	F	A	R	H	S	P	K	I	R	L	T	L	C	D	V	S	A	P	A	V	E	A	S	R	A	T	L	A	A	N	G	V	E	G	E	V	F	A	S	N	V	F	S	E	V	K	G	R	F	.	.	.	.	.	.	.	.	.	.	D	M	I	I	S	N
Query Conservation																																																																		.	.	.	.	.	.	.	.	.	.
Alig confidence																								.																					.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Template Conservation																								.																					.	.	.	.
Template Sequence		N	V	I	D	L	F	S	G	V	G	G	L	S	L	G	A	A	R	A	G	F	D	.	V	K	M	A	V	E	I	D	Q	H	A	I	N	T	H	A	I	N	F	P	.	.	.	.	R	S	L	H	V	Q	E	D	V	S	L	L	N	A	E	I	I	K	G	F	F	K	N	D	M	P	I	D	G	I	I	G	G
Template Known Secondary structure							T		T	T	S										T			.							S													T	.	.	.	.	T	S							G	G	G												S
Template Predicted Secondary structure																								.																					.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.					.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310			.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure																																												.	.
Query SS confidence																																												.	.
Query Sequence		P	P	F	H	D	G	M	Q	T	S	L	D	A	A	Q	T	L	I	R	G	A	V	R	H	L	N	S	G	G	E	L	R	I	V	A	N	A	F	L	P	Y	P	.	.	D	V	L	D	E	T	F	G	F	H	E	V	I	A	Q	T	G	R	F	K	V	Y	R	A
Query Conservation																																												.	.
Alig confidence																																												.	.
Template Conservation
Template Sequence		P	P	C	Q	G	F	S	D	D	S	R	N	Q	L	Y	M	H	F	Y	R	L	V	S	E	L	Q	P	L	F	F	L	A	E	N	V	P	G	I	M	Q	E	K	Y	S	G	I	R	N	K	A	F	N	L	V	S	G	D	Y	D	I	L	D	P	I	K	V	K	A
Template Known Secondary structure						T	T																						S								T	T	T	T		G	G	G													T	T											G
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions