Job Description P39406 Confidence 99.84% Date Thu Jan 5 12:00:42 GMT 2012 Rank 18 Aligned Residues 161 % Identity 16% Template c3eeyJ_ PDB info PDB header:transferase Chain: J: PDB Molecule:putative rrna methylase; PDBTitle: crystal structure of putative rrna-methylase from clostridium2 thermocellum Resolution 2.20 Å

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		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.		.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.			.	.	.	.	250	.	.	.	.
Predicted Secondary structure																																											.																												.	.
Query SS confidence																																											.																												.	.
Query Sequence		R	D	G	L	D	V	G	S	Q	L	L	L	S	T	L	T	P	H	T	K	G	K	V	L	D	V	G	C	G	A	G	V	L	S	V	A	F	A	R	H	S	.	P	K	I	R	L	T	L	C	D	V	S	A	P	A	V	E	A	S	R	A	T	L	A	A	N	G	V	.	.	E	G	E	V	F	A	S	N	V
Query Conservation																																											.																												.	.
Alig confidence																			.	.																							.																												.	.
Template Conservation																			.	.
Template Sequence		K	N	S	L	G	Q	S	H	D	Y	I	K	M	F	V	K	E	.	.	G	D	T	V	V	D	A	T	C	G	N	G	N	D	T	A	F	L	A	S	L	V	G	E	N	G	R	V	F	G	F	D	I	Q	D	K	A	I	A	N	T	T	K	K	L	T	D	L	N	L	I	D	R	V	T	L	I	K	D	G	H
Template Known Secondary structure																		T	.	.	T						S			T	T	S												T	T								S															T	T		G	G	G						S		G
Template Predicted Secondary structure																			.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20			.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		255	.	.	.				.	260	.	.	.	.	.	.	.	.	.	270	.	.	.					.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.																.	.	.	.
Query SS confidence						.	.	.																.	.	.	.
Query Sequence		F	S	E	V	.	.	.	K	G	R	F	D	M	I	I	S	N	P	P	F	H	D	.	.	.	.	G	M	Q	T	S	L	D	A	A	Q	T	L	I	R	G	A	V	R	H	L	N	S	G	G	E	L	R	I	V	A	N	A	F	L	P	Y	P	D	V	L	D	E	T	F	G	F	H	E	V	I	A	Q	T	G
Query Conservation						.	.	.																.	.	.	.
Alig confidence						.	.	.																.	.	.	.
Template Conservation
Template Sequence		Q	N	M	D	K	Y	I	D	C	P	V	K	A	V	M	F	N	L	G	Y	L	P	S	G	D	H	S	I	S	T	R	P	E	T	T	I	Q	A	L	S	K	A	M	E	L	L	V	T	G	G	I	I	T	V	V	I	Y	Y	G	G	D	T	G	F	E	E	K	E	K	V	L	E	F	L	K	G	V	D	Q	K
Template Known Secondary structure		G	G	G	G	G	T			S										S			T	T	S		S	S																																	S	S	S														T	S		T	T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		328	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure
Query SS confidence
Query Sequence		R	F	K	V	Y	R	A	I	M	T	R	Q	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	F	I	V	Q	R	T	D	F	I	N	Q	A
Template Known Secondary structure		T									T	T
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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