Return to main results Retrieve Phyre Job Id

Job DescriptionP39406
Confidence99.53%DateThu Jan 5 12:00:42 GMT 2012
Rank225Aligned Residues113
% Identity15%Templatec3dp7B_
PDB info PDB header:transferaseChain: B: PDB Molecule:sam-dependent methyltransferase; PDBTitle: crystal structure of sam-dependent methyltransferase from bacteroides2 vulgatus atcc 8482
Resolution2.33 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   186...190.........200.........210.........220.........230.........240..... ....250...... ...260
Predicted Secondary structure 






















..






...



Query SS confidence 



























































. .










. . .



Query Sequence  QLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGV. . EGEVFASNVFS. . . EVKG
Query Conservation    

  
       




 
 
                  
        
        
..       
   ...    
Alig confidence 










































.















..










...



Template Conservation                




 
 
     
    
       
 .                                    
Template Sequence  GKALEIVFSHHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL. PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFPT
Template Known Secondary structure  TT

ST
TT

SS

.TTT
TTGGG

SS
TTS



Template Predicted Secondary structure 















.

















Template SS confidence 















































































   169170.........180.........190.........200.........210. ........220.........230.........240.......
 
   261........270.........280.........290.........300..
Predicted Secondary structure 













Query SS confidence 









































Query Sequence  RFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIV
Query Conservation    
 

 


 
                    
 


 
  
Alig confidence 











...


























Template Conservation    
      

 ...          
      
 


 


 
Template Sequence  GFDAVWMSQFLD. . . CFSEEEVISILTRVAQSIGKDSKVYIM
Template Known Secondary structure 

SS
ST...TS
TT

TT
Template Predicted Secondary structure 



...







Template SS confidence 









































   248.250......... 260.........270.........280......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions