Job Description P39406 Confidence 99.77% Date Thu Jan 5 12:00:42 GMT 2012 Rank 70 Aligned Residues 119 % Identity 18% Template c3bkxB_ PDB info PDB header:transferase Chain: B: PDB Molecule:sam-dependent methyltransferase; PDBTitle: crystal structure of cyclopropane-fatty-acyl-phospholipid synthase-2 like protein (yp_807781.1) from lactobacillus casei atcc 334 at 1.853 a resolution Resolution 1.85 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.		.	220	.	.	.	.	.	.	.	.	.	230							.	.	.	.	.	.	.	.	.	240	.	.	.	.	.			.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure																																				.													.	.	.	.	.	.																.	.
Query SS confidence																																				.													.	.	.	.	.	.																.	.
Query Sequence		S	Q	L	L	L	S	T	L	T	P	H	T	K	G	K	V	L	D	V	G	C	G	A	G	V	L	S	V	A	F	A	R	H	S	.	P	K	I	R	L	T	L	C	D	V	S	A	.	.	.	.	.	.	P	A	V	E	A	S	R	A	T	L	A	A	N	G	V	.	.	E	G	E	V	F	A	S	N	V	F
Query Conservation																																				.													.	.	.	.	.	.																.	.
Alig confidence																																				.													.	.	.	.	.	.																.	.
Template Conservation
Template Sequence		R	L	A	I	A	E	A	W	Q	V	K	P	G	E	K	I	L	E	I	G	C	G	Q	G	D	L	S	A	V	L	A	D	Q	V	G	S	S	G	H	V	T	G	I	D	I	A	S	P	D	Y	G	A	P	L	T	L	G	Q	A	W	N	H	L	L	A	G	P	L	G	D	R	L	T	V	H	F	N	T	N	L
Template Known Secondary structure										T			T	T							S		T	T	S												T	T								S	S		T	T			S	S	S												S	T	T	G	G	G					S	S			T
Template Predicted Secondary structure
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		256						.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.
Query SS confidence			.	.	.	.	.
Query Sequence		S	.	.	.	.	.	E	V	K	G	R	F	D	M	I	I	S	N	P	P	F	H	D	G	M	Q	T	S	L	D	A	A	Q	T	L	I	R	G	A	V	R	H	L	N	S	G	G	E	L	R	I	V	A	N	A	F	L	P
Query Conservation			.	.	.	.	.
Alig confidence			.	.	.	.	.																		.	.	.	.	.
Template Conservation																									.	.	.	.	.
Template Sequence		S	D	D	L	G	P	I	A	D	Q	H	F	D	R	V	V	L	A	H	S	L	W	Y	.	.	.	.	.	F	A	S	A	N	A	L	A	L	L	F	K	N	X	A	A	V	C	D	H	V	D	V	A	E	W	S	X	Q	P
Template Known Secondary structure		T	T			G	G	G	T	T				S						S		G	G	G	.	.	.	.	.	S	S													T	T	T		S									S	S
Template Predicted Secondary structure																									.	.	.	.	.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.						.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions