Job Description P39406 Confidence 95.54% Date Thu Jan 5 12:00:42 GMT 2012 Rank 331 Aligned Residues 90 % Identity 28% Template c3b5iB_ PDB info PDB header:transferase Chain: B: PDB Molecule:s-adenosyl-l-methionine:salicylic acid carboxyl PDBTitle: crystal structure of indole-3-acetic acid methyltransferase Resolution 2.75 Å

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		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.				.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	V	L	D	V	G	C	G	A	G	V	L	S	V	A	F	A	R	H	S	P	K	I	R	L	T	L	C	D	V	S	A	P	A	V	E	A	S	R	A	T	L	A	A	N	G	V	.	.	.	E	G	E	V	F	A	S	N	V	F	S	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	A	V	D	L	G	C	S	S	G	A	N	T	V	H	I	I	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	I	V	K	H	I	S	K	R	F	D	A	A	G	I	D	P	P	E	F	T	A	F	F	S	D	L	P	S	N	D	F	N	T	L	F	Q	L	L	P	P	L	V	S	N	D	G	N
Template Known Secondary structure							T			S	S	S								.	.	.	.	.	.	.	.	.	.	.	.	.	.													T	T														T	T	S									S			B
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.															.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
																				259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280																																		.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	G	R	F	D	M	I	I	S	N	P	P	F	H	D	G	M	Q	T	S	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	Q	T	L	I	R
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	S	Y	F	V	A	G	V	P	G	S	F	Y	R	R	L	F	P	A	R	T	I	D	F	F	H	S	A	F	S	L	H	W	L	S	Q	V	P	E	S	V	T	D	R	R	S	A	A	Y	N	R	G	R	V	F	I	H	G	A	G	E	K	T	T	T	A	Y	K	R	Q	F	Q	A	D	L	A	E	F	L	R
Template Known Secondary structure		B		S							S		T	T	S			S		T	T									S		T	T	B		S	S			G	G	G	G		T	T	S	T	T			T	T	T	S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	V	R	H	L	N	S	G	G	E	L	R	I	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	R	A	A	E	V	K	R	G	G	A	M	F	L	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions