Job Description P39406 Confidence 99.73% Date Thu Jan 5 12:00:42 GMT 2012 Rank 100 Aligned Residues 130 % Identity 14% Template c2yvlB_ PDB info PDB header:transferase Chain: B: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of trna (m1a58) methyltransferase trmi from aquifex2 aeolicus Resolution 2.20 Å

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		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.			.	.	.	.	250	.	.	.	.			.	.	.	.	.	260
Predicted Secondary structure																																																															.	.										.	.
Query SS confidence																																																															.	.										.	.
Query Sequence		S	Q	L	L	L	S	T	L	T	P	H	T	K	G	K	V	L	D	V	G	C	G	A	G	V	L	S	V	A	F	A	R	H	S	P	K	I	R	L	T	L	C	D	V	S	A	P	A	V	E	A	S	R	A	T	L	A	A	N	G	V	.	.	E	G	E	V	F	A	S	N	V	.	.	F	S	E	V	K	G
Query Conservation																																																															.	.										.	.
Alig confidence																																		.	.																												.	.										.	.
Template Conservation																																		.	.
Template Sequence		S	F	Y	I	A	L	K	L	N	L	N	K	E	K	R	V	L	E	F	G	T	G	S	G	A	L	L	A	V	L	S	E	.	.	V	A	G	E	V	W	T	F	E	A	V	E	E	F	Y	K	T	A	Q	K	N	L	K	K	F	N	L	G	K	N	V	K	F	F	N	V	D	F	K	D	A	E	V	P	E	G
Template Known Secondary structure									T	T			T	T									T	T	S									.	.		S	S							S	S														T	T			T	T						S		T	T	T	S				T	T
Template Predicted Secondary structure																																		.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.			.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	F	D	M	I	I	S	N	P	P	F	H	D	G	M	Q	T	S	L	D	A	A	Q	T	L	I	R	G	A	V	R	H	L	N	S	G	G	E	L	R	I	V	A	N	A	F	L	P	Y	P	D	V	L	D	E	T	F	G	F	H	E	V	I	A	Q	T	G	R	F	K	V	Y	R	A	I
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.																				.	.	.	.																	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.																				.	.	.	.																	.	.	.	.	.
Template Sequence		I	F	H	A	A	F	V	D	V	R	E	P	.	.	.	.	.	.	.	.	.	.	W	H	Y	L	E	K	V	H	K	S	L	M	E	G	A	P	V	G	F	.	.	.	.	L	L	P	T	A	N	Q	V	I	K	L	L	E	S	I	E	.	.	.	.	.	N	Y	F	G	N	L	E	V	V
Template Known Secondary structure			B	S						S	S		G	.	.	.	.	.	.	.	.	.	.	G	G	G								B		T	T						.	.	.	.			S	S												T	.	.	.	.	.	T	T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.																				.	.	.	.																	.	.	.	.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.											170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.					.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.						.	.	.	.	.	210	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions