Return to main results Retrieve Phyre Job Id

Job DescriptionP39406
Confidence99.75%DateThu Jan 5 12:00:42 GMT 2012
Rank87Aligned Residues115
% Identity17%Templatec2yr0A_
PDB info PDB header:transferaseChain: A: PDB Molecule:hypothetical protein ttha0223; PDBTitle: crystal structure of hypothetical methyltransferase ttha0223 from2 thermus thermophilus hb8
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   184.....190.........200.........210.........220.........230.........240.........250.... .....260.
Predicted Secondary structure 



























..






Query SS confidence 






































































. .






Query Sequence  GSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNV. . FSEVKGR
Query Conservation      

  
       




 
 
                  
        
        
       
 ..       
Alig confidence 



































..
































..






Template Conservation    
    
     
 









     
     .. 
 


 
      
                           
Template Sequence  ATAXASAVHPKGEEPVFLELGVGTGRIALPLIARGY. . RYIALDADAAXLEVFRQKIAGVDRKVQVVQADARAIPLPDES
Template Known Secondary structure  T


TTS

T
TTSTTTTT
..S
TTTS
TT

GGG

S
TT
Template Predicted Secondary structure 















..



























Template SS confidence 















































































   27..30.........40.........50.........60.. .......70.........80.........90.........100....
 
   262.......270.........280.........290.........300.....
Predicted Secondary structure 













Query SS confidence 











































Query Sequence  FDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANA
Query Conservation   
 

 


 
                    
 


 
  
 
 
Alig confidence 











.....


























Template Conservation 

 
     
  .....  
    
    






 
      
Template Sequence  VHGVIVVHLWHL. . . . . VPDWPKVLAEAIRVLKPGGALLEGWDQ
Template Known Secondary structure  S
GGG.....
S
Template Predicted Secondary structure 



.....








Template SS confidence 











































   105....110...... ...120.........130.........140...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions