Job Description P39406 Confidence 99.14% Date Thu Jan 5 12:00:42 GMT 2012 Rank 276 Aligned Residues 139 % Identity 14% Template c2r6zA_ PDB info PDB header:transferase Chain: A: PDB Molecule:upf0341 protein in rsp 3' region; PDBTitle: crystal structure of the sam-dependent methyltransferase2 ngo1261 from neisseria gonorrhoeae, northeast structural3 genomics consortium target ngr48 Resolution 1.80 Å

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		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.								.	.	.	.	240	.	.	.	.	.			.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.											.	.											.	.
Query SS confidence																																																			.	.	.	.	.	.	.											.	.											.	.
Query Sequence		L	L	L	S	T	L	T	P	H	T	K	G	K	V	L	D	V	G	C	G	A	G	V	L	S	V	A	F	A	R	H	S	P	K	I	R	L	T	L	C	D	V	S	A	P	A	V	E	A	.	.	.	.	.	.	.	S	R	A	T	L	A	A	N	G	V	.	.	E	G	E	V	F	A	S	N	V	F	.	.
Query Conservation																																																			.	.	.	.	.	.	.											.	.											.	.
Alig confidence																																	.	.																	.	.	.	.	.	.	.											.	.											.	.
Template Conservation																																	.	.
Template Sequence		L	I	A	K	A	V	N	H	T	A	H	P	T	V	W	D	A	T	A	G	L	G	R	D	S	F	V	L	A	S	L	.	.	G	L	T	V	T	A	F	E	Q	H	P	A	V	A	C	L	L	S	D	G	I	R	R	A	L	L	N	P	E	T	Q	D	T	A	A	R	I	N	L	H	F	G	N	A	A	E	Q
Template Known Secondary structure							T	T	G	G	G							T	T		T	T										T	.	.	T																										S								T	T						S
Template Predicted Secondary structure																																	.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
						256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.			.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.																							.	.
Query SS confidence		.	.	.	.																							.	.
Query Sequence		.	.	.	.	S	E	V	K	G	R	F	D	M	I	I	S	N	P	P	F	H	D	G	M	Q	T	.	.	S	L	D	A	A	Q	T	L	I	R	G	A	V	R	H	L	N	S	G	G	E	L	R	I	V	A	N	A	F	L	P	Y	P	D	V	L	D	E	T	F	G	F	H	E	V	I	A	Q	T	G	R	F
Query Conservation		.	.	.	.																							.	.
Alig confidence		.	.	.	.																							.	.																.	.																.	.	.
Template Conservation																																													.	.																.	.	.
Template Sequence		X	P	A	L	V	K	T	Q	G	K	P	D	I	V	Y	L	D	P	X	X	A	Y	F	H	R	L	V	G	E	A	Q	D	E	V	V	L	L	H	T	A	R	Q	T	.	.	A	K	K	R	V	V	V	K	R	P	R	L	G	E	H	.	.	.	L	A	G	Q	A	P	A	Y	Q	Y	T	G	K	S	T	R	F
Template Known Secondary structure													S																S																.	.		S	S								T	T				.	.	.	G	G	G				S						S	S
Template Predicted Secondary structure																																													.	.																.	.	.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.			.	.	.	.	.	200	.	.	.	.	.	.	.	.	.				210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		330	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	V	Y
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		240	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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